Simkania negevensis: SNE_A21850
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Entry
SNE_A21850 CDS
T01559
Symbol
secDF
Name
(GenBank) putative bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
sng
Simkania negevensis
Pathway
sng02024
Quorum sensing
sng03060
Protein export
sng03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SNE_A21850 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SNE_A21850 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNE_A21850 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sng02044
]
SNE_A21850 (secDF)
Secretion system [BR:
sng02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SNE_A21850 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
MMPL
SecD_1st
ACR_tran
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
CCB90062
UniProt:
F8L431
LinkDB
All DBs
Position
gsn.131:2263057..2267628
Genome browser
AA seq
1523 aa
AA seq
DB search
MEKRKRWQFILITVVIFLTIYNILPTVLFYSKPLNEPIGEKKAYEVAYQAASRVNQLEPE
AISWLKSYNKLLKTKAKSIKIDEKNPELIHLEFDSEKDATTFKNHLPRAGSLIPFVPAQL
ALTEGSQEALATEVTLKRNIPIQFDINNLKADFKFVEKKDEKGEITPAYHELIDDRLLQL
GLSIGGTTENAAYVETILHHMGNPRSEEFLQILSQNILTYSKIFGENSPIAKRYFATFTQ
GKVSNRSDTIATLTKAFESELDKIKLERISLQDKEKSLRDKGGFLETTEQQKLDYLRSKE
DQFFAATQILRRQSGAFSQGAAPWSYPSLIKLIGSTYAGVSSEHPVQTIHVGDHNPLIKN
LTIDWNSEKILLDLHGDIQALRKQLEREKGKSHARDQLDQLIYNEVARISRESGEQLSPY
RNAFQIDLNTLTNSQSFLVMDIGSLAETQAKQMKNLISSQWHPTYPDLRSEVFPIWDFAT
YEKLPTHQKKLGLVIYAPAADQNAPQTGFRTNSVYVIAKGVQDIITKLQTNPNSPQAKAF
MEDFEKLRILLHQSGFYGYPGTTYPLSASFAKDFIFEAEDFYQTILMATREDFNVHGTRR
FATLEFTNVEQRIYALNRIETQMHEDLLKWRDEYQAAQVKSQLEAKYDVPAPTKNPLFSN
LALSFRKYFRGDERKILHWGLDLSGGKTVQIELRDANNRVVTNEDDIKQGINELYNRVNK
MGVSEVSIRQEGNHITLDFPSAQGLSAADLVKASSMFFHVVNEKFSTENRELRTSVNQFL
QDVWNEAVVTNRKDIDSINMIAWKHLFGDTMDTESVQPVNESAKTLYDQGLRLGYPGDTK
QSSGFNDSLCKIAIYRGDSFSEWHGQTHPLLIVMNNYALEGSNLIDVRAAYDPSQGNFLT
FNVKSSQTLVDGQKTNPRNDLYNWTSAFSKEKISGTALGNISNGRGWRMAVILNGSVISA
PAIESGLRDHVSITGSFTQREANRLEADLKAGSLSFAPHILSEKNVSPELGLKDRAMGII
ATIVALVLVILMMVGYYRFAGVVASVAVLFNLLIMWATLQNIQATVTLAGIAGIILTVGM
AVDANVLVFERIREEFAASNRIASAVHTGYRKAFSAILDSNVTTIIAALILLHFDSGPIK
GFAITLIIGIVSSMFSALFMTRYFFAGWVKNPKNQALKMASLIKKTSVNFLKYGKWGFSF
SLIIALVGAYLFVSQKNTMLGMDFTGGYALSLEVEPKADTNYRFDVEAALVKAGLSPRDF
QVRELSPSNHLKILLSNSLDQSGKPFEYLPFETDQKDVAYAYENNPRLVWVVGALIKGGL
EVTPVSLKQLDSSWTSISGQMSNAMRNNALIGLTLALVCILLYITFRFEFKYAISATLGL
AIDVVITLALLTILHTIGVPVQIDLNTIAALMTIIGYSLNDTIIIFDRIREDLKVMRKHS
FKDVINHALNVTLSRTIMTSGTTLVVLLALLFLGGSTIFGLSLVMVIGVVFGTLSSLYIA
APLLLFFHRMEQKKSEKLALNEK
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgcaagcgctggcaatttattttgatcacggttgtcatttttttgacaatc
tataacattctcccaacagtcctcttttactctaaaccactcaacgagccgattggagaa
aaaaaagcttacgaagtcgcttatcaagctgcttctcgtgttaaccaacttgagcctgaa
gcgatcagctggttaaaatcttacaacaagctcttgaaaacgaaagccaagtcaatcaag
attgacgagaaaaatcccgaacttattcatctagagtttgattctgaaaaagatgcgacc
acctttaaaaatcatcttccgcgtgctggatccttgattccttttgttcctgctcaactg
gctttaacagaaggaagccaagaagcattagcaacagaagtgactctgaagcgcaatatc
cccattcaatttgatattaataacttaaaagctgatttcaaatttgttgaaaagaaagat
gaaaaaggagaaatcaccccagcataccacgaattgattgacgatcgcctactgcaatta
ggtttatcaattggaggaacaaccgaaaatgctgcttatgtggaaaccatcttgcaccac
atggggaaccctcgctctgaagagtttcttcaaattttatcgcaaaacattctcacctat
tcaaaaatttttggtgaaaattcccccattgcaaaacggtattttgcgacatttacccaa
ggcaaagtgtctaaccgttctgatacaattgccacactaacaaaagcttttgaaagcgaa
ctagacaagattaaacttgagcggatcagtcttcaagacaaagaaaagagcctgcgtgat
aaaggaggctttctagaaacaactgaacaacaaaaactcgactacctacgctcaaaagaa
gaccagtttttcgcagcaacccagattctgcgccgtcaaagcggggcatttagtcaagga
gctgccccttggtcttacccatctctcattaagctcattggatcaacctatgcaggcgtg
agctccgaacatccagtccaaacgatccatgttggagaccataacccgctcattaaaaat
cttacaattgattggaacagtgaaaaaattctcctcgatctccatggagacattcaagca
cttcgcaagcaactcgagcgagaaaaaggaaaatctcatgcccgcgaccaactcgaccaa
ctgatttacaatgaagtcgcacgcattagccgtgaatccggagaacaactatcaccttac
cgcaatgctttccaaattgatctcaacaccttaacaaacagccaaagctttcttgtgatg
gatatcggctcacttgctgaaacccaagcaaagcagatgaaaaacttaatttcgtcccaa
tggcaccccacctatcccgaccttcgaagcgaagttttccccatttgggattttgcaaca
tatgaaaaacttccgacacaccaaaagaaattaggcctcgtcatttacgctcctgcagca
gatcaaaatgctccacagactggcttccgcacaaactctgtgtatgtcattgcgaaagga
gtgcaagatatcattactaaactgcaaacaaatccgaattcgcctcaagcaaaagctttc
atggaagatttcgaaaaacttcgcatcctactccatcaaagcggcttttatggataccca
ggcacaacttatcctttaagtgcgtcatttgcaaaagatttcatcttcgaagctgaagac
ttctatcaaaccatcttgatggcaacgagagaagacttcaacgtgcatggaacaagacgg
ttcgcaacattggaattcaccaatgttgaacaacgcatttatgctttgaatcggatcgaa
acccaaatgcatgaagatcttctaaagtggagagatgagtaccaagcagcccaagttaaa
tcccaacttgaagcaaaatacgatgttcctgctccaacaaagaatcctcttttcagcaat
ctcgcgctcagcttccgcaagtatttccgcggagatgaacgaaaaattcttcattgggga
ctcgacctatcaggtggaaagaccgttcaaattgaactccgcgatgcaaataaccgtgtc
gttacaaatgaagatgacatcaagcaaggcattaacgaactttacaaccgcgtcaataaa
atgggtgtgtccgaagtttctatccgtcaagaaggaaatcatatcacccttgacttccca
agtgcgcaaggactctcagctgcagacttagtcaaagcctcttcgatgttctttcacgtt
gtaaatgaaaagttctcaacagaaaatcgagagctccgtacatctgtgaaccaattcctt
caagacgtgtggaacgaagcagttgtgacaaatcgcaaagatattgacagtatcaacatg
attgcctggaaacaccttttcggcgacaccatggataccgagtcagttcaacctgtgaac
gagtcggcaaaaacactctacgatcaaggcttacgcctaggatatcctggagacactaaa
caatcgagtgggttcaatgactctctttgtaaaattgctatctatcgtggagacagtttc
tctgaatggcatggacaaactcatcccctcttgattgtgatgaataactacgctctagaa
ggctctaaccttatcgacgtccgcgctgcctatgacccctcacaaggaaacttcctaaca
tttaatgtgaagtcatcgcaaactctcgtagatggacaaaagactaacccacgtaatgac
ttatacaattggacatcagctttttcgaaagaaaaaatttcagggacagctcttggaaat
atctcaaacggacggggatggcgcatggcggttattctcaatggatcggtgatcagtgca
cctgcaattgagtctggacttcgcgatcacgtttctattacaggaagctttacacagcgc
gaagcaaatcgcttggaagccgacttaaaagctggttccttaagctttgcaccccacatt
ctttcggaaaagaacgtcagtcctgaacttggattaaaagaccgtgcgatgggaatcatc
gcaacgattgtcgctttagtccttgtgatcttaatgatggttggctactacagatttgcc
ggggttgtggcctcagttgctgtcttgtttaacctcctcatcatgtgggccactcttcaa
aacattcaagcaactgtcacccttgccggaattgctggaattattttgacagttggtatg
gctgttgatgccaacgtcctcgtattcgaaagaatccgcgaagagtttgctgcatctaac
cgcattgcatcagctgttcacacaggatatagaaaagctttttcagccatcttagattcg
aacgtcacaactatcattgcagccctcattttactccattttgattcaggacccatcaaa
ggttttgcgatcaccttgattatcggaattgtttcgtcgatgttttctgcacttttcatg
acacgatacttctttgcaggatgggttaaaaatccgaaaaatcaagctttaaaaatggca
agtttgattaagaaaacctctgtcaattttctaaagtatggaaagtggggctttagtttt
tcattgattattgccctcgttggagcttacttatttgtttcacagaaaaacacaatgctt
ggaatggacttcactgggggatatgccctttctcttgaagtcgagcctaaagctgataca
aattaccgcttcgatgtagaagctgcacttgtaaaagcaggtctttctccaagagacttc
caagtacgcgagctctctccttcaaatcaccttaaaattttgcttagcaatagccttgat
caaagtggtaagcctttcgagtaccttccttttgaaaccgatcaaaaagatgttgcttac
gcatatgagaataacccgcgtctcgtgtgggttgtgggagcattgataaaaggtgggctt
gaagtgacccctgtgtctctcaagcaactcgacagcagctggactagcatcagcggtcaa
atgtcaaatgcaatgcgcaataacgcccttatcggtcttacactagccctcgtttgcatc
cttttatacatcacattccgctttgagtttaaatatgcaatcagtgcgactctaggactt
gctattgatgttgtgatcactcttgctcttcttacaatcttgcatacaattggcgttccc
gttcaaatcgatttaaacaccatcgccgcattgatgaccatcatcggatactctttaaat
gacacgatcattatttttgaccgtatccgagaagaccttaaagtgatgcgcaagcattct
ttcaaagatgtcatcaatcatgccctcaatgtcaccttaagtcgtacaatcatgacttca
ggaaccacattggtggtcttattagccctccttttcttaggtggaagcactatttttgga
ctttcacttgtgatggtcattggggtcgtttttggaactctttcttccctctatattgcg
gcaccactcctacttttttttcacagaatggaacagaaaaaaagcgaaaagttagcattg
aacgaaaaatag
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