Simkania negevensis: SNE_A22680
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Entry
SNE_A22680 CDS
T01559
Symbol
pcrA-B
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sng
Simkania negevensis
Pathway
sng03420
Nucleotide excision repair
sng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNE_A22680 (pcrA-B)
03430 Mismatch repair
SNE_A22680 (pcrA-B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A22680 (pcrA-B)
Enzymes [BR:
sng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNE_A22680 (pcrA-B)
DNA repair and recombination proteins [BR:
sng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNE_A22680 (pcrA-B)
MMR (mismatch excision repair)
Other MMR factors
SNE_A22680 (pcrA-B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_30
UvrD_C_2
PhoH
AAA_14
AAA_12
DEAD
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCB90145
UniProt:
F8L497
LinkDB
All DBs
Position
gsn.131:2358719..2360842
Genome browser
AA seq
707 aa
AA seq
DB search
MIDLNAKQQLAAEHIEGPMLVLAGAGSGKTRVVTCRIAHLLKIGVPSSEILALTFTNKAA
EEMRNRIKEIANHYVLTSTFHSLGARILRESISVLGYRSDFTIYDENDSLQLLKNCLGSL
GYKDDKGLLKSLRIAISNAKNDLLRPQDLDRDFHSRHDQLLKELYVMYQDKLKEYNALDF
DDLLFLTVRLFRESPETLKRYQKRWSFILIDEYQDTNAAQYEMTKLLSEVHNNIFVVGDP
DQSIYSWRGANIHNILEFEKDYAGAQVITLEQNYRSTTNILEGANALIEQNEQRYKKELW
SDLGAGEKIGIFMARNEQAEAQFVVEELISKTRSEHIPLRECVIFYRTNAQSRIFEDAFL
KYQIPYVIIGGLSFYQRREIKDILALLRMVVSNADFLSFARTINLPKRGIGPTTLNKWRD
LAEELALPILSLCRELMSGNVTQAPLTKKQEEGLRDYFGVLASLKSMCDERLPLEEIVQA
AIEQSRYLDVLKADPETASDRKENLEALINKAAEWSEERETPTLIHFLEELSLKSSLDEA
PEYDSVRLMTLHNGKGLEFDLTFIVGMEEDLFPHINSKDSIEALEEERRLCYVGMTRAKQ
FLYLTASTYRFMWGTPKVMVPSRFLKEVPPEYLTVLSAEEKEEEEFHFDDEEKMAIGTVV
FHKDFGKGLIKKAYNTSLGVTYDVLFFESNMVRSLVGKYAKFKNLST
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatagatctcaatgcaaaacagcaacttgccgccgagcatattgaagggcccatgctt
gtcttagctggcgctggctcaggtaaaacccgtgttgtcacttgccgcattgctcacctc
ctaaaaattggagttccttcttctgagattttggcgctcacttttaccaataaagctgcc
gaggaaatgcgcaatcggatcaaagagattgcaaaccactatgtgctgacctctacattt
cactcacttggagcccgcattttacgggaatccatttcagtcttaggataccggagtgat
ttcaccatttacgatgaaaatgacagtttacaactgcttaaaaactgcttggggtccctc
ggttataaagacgacaagggattgctcaagtcgctccgcattgcgatttcaaatgccaaa
aacgatttactcaggcctcaagatctcgaccgagatttccattcacgtcacgatcagtta
cttaaagagttgtacgtgatgtatcaagataaacttaaagaatacaacgcactcgacttt
gatgatctgctttttttaactgtgcgtttgtttagggaatcacccgaaacgttaaaacgg
tatcaaaaaaggtggtcgttcattctaattgatgaatatcaagacacaaatgctgctcaa
tatgaaatgacgaaacttctttccgaggtgcacaataacatctttgtggtcggagatccc
gatcaatcgatttactcatggcgtggcgccaatatccacaacattctcgaatttgaaaaa
gactatgcaggggcgcaagtcatcacccttgagcaaaactaccgcagcactacgaatatc
ttggaaggagccaatgcacttatcgagcaaaacgagcagcgctacaaaaaagaactatgg
agtgatcttggtgcaggagaaaaaattggaatctttatggcgcgcaatgagcaagctgaa
gcgcagtttgtcgtcgaagaactgataagcaagacccgctcagaacacattcctctaaga
gagtgtgtcattttttaccgcaccaacgctcaatcacgcatttttgaagatgcattttta
aaataccaaattccctatgtgatcattggagggctttccttttaccaaagacgggaaatc
aaagacatcttagccctgctacggatggttgtttctaatgcagattttctctcatttgct
cgcaccatcaacttgccaaaaagggggatcggacccacaaccttaaataaatggcgtgat
ttagctgaagagttagcacttccaattctttctctttgccgcgaactcatgagtggcaat
gtgacccaagcccctctcacaaaaaaacaagaagaaggactgcgtgactattttggggtg
cttgcctcattgaaatcgatgtgcgatgaaaggttgcctcttgaagaaatcgtgcaagca
gcgattgagcagtctcgttacttagatgtcctaaaagctgaccctgaaacggcaagcgat
cggaaagaaaatctcgaggcgctcatcaacaaagcagcagagtggagcgaagaaagggaa
acacccaccctcattcattttttagaagagctttcactcaaatcaagtctcgacgaagca
ccggaatacgactcggtccgtttgatgacccttcacaacggaaaaggattggagtttgat
ctgacatttattgtggggatggaagaagatctctttccccatattaattcaaaagattcc
attgaggcgctggaagaagaaaggcgcctttgctatgtcgggatgacccgcgcgaaacag
tttctctatttgactgcctcgacctaccggttcatgtggggaactccaaaagtcatggtt
cctagccgctttttaaaagaggtaccacctgaatatcttacagtcctttctgcagaagaa
aaggaagaagaggagttccatttcgacgacgaagaaaaaatggctattggaaccgttgtc
tttcataaagacttcggaaaaggactgatcaaaaaagcctacaacacttctcttggagtg
acatacgatgtgctttttttcgagagtaatatggtgcggtctttggtagggaaatatgcg
aaatttaagaatttatcgacgtaa
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