Simkania negevensis: SNE_B24280
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Entry
SNE_B24280 CDS
T01559
Symbol
traA
Name
(GenBank) conjugal transfer relaxase/helicase protein TraA
Organism
sng
Simkania negevensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
MobA_MobL
Viral_helicase1
AAA_22
AAA_19
TraI_hel_assoc_N
DUF6371
PIF1
AAA_16
Toprim
SH3_13
SLFN-g3_helicase
NACHT
AAA_11
nSTAND3
Toprim_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CCB87787
UniProt:
F8L2U1
LinkDB
All DBs
Position
pSn:35777..40561
Genome browser
AA seq
1594 aa
AA seq
DB search
MAIGFGRIEFIKRSEGRNACQLSAYLSRSRIFFEGNCALEPKLYDFSHREDVYHHEIILP
EGADENLRNPEVLWNLAERKEVRKDAQVSMHLVLALPDDKEITPEERVELASTFIKKHYD
GLVAEVVIHPPERTIEFTEENEALGIPKGIVGTVIEKKGENYIVSLPKGVRANPFVEIGV
NYPGMSVQEHNWHAHAQLSTRRLKYNGKEFEDYKATDLMPVVMKGKVVEGLDVGKLWAQH
QNEFFLSKGLALRVEDNGLIAQEHLGPVRMRGRAYALLEEHEKRLELNALASSDPKNILE
ALTDRQSVFTKDDVERFILKHTPADKVPEVTELFWKQEELVHLRDKKTLEFVSKFTSRAV
LNEERQILRLADRIYEKPTKNIPESIQEQFDNTLTKEQKSAYKNILNGKGLCCVQGYAGV
GKSYLLQALKNAYEERGLKVRAFGPDNATANVLNEKGFSNAENLYRFLYSQKHGLRNIHK
GFEVWVLDEAGKLGNKPLLEFLKLAEKKGVKVVLAGDSSQLPSVQRGGAFKFFSTRYQTE
VLEDIQRQKDELARSMAKDLAIGKAGSALDKLSAMGSIKWAPTKKEAMEDLVIKWAIDHR
DTEKNGSRNAFDSSIIVAHTNSEVRALNEMVRLVRKQRGEISSREFRCEVVSGDQDKASI
FISEGDRVEFRKKDRELGVSNGDMGVLVRAEKDEFVVAIQENGKKTRMARFDPSRYRGFQ
LGYASTAQCVQGRTVDRAYILHSPYLNQQMAYVKLTRHVDNVTYFVSKEEASTLSDLKRQ
ALRDGSKSGAYCYTDTEEIEEKFLLQKKEFDIETLRNSDEFKSRFKGITLRAWEEVKGRA
LDFIGIKQDRSQDSVFFSFKGDNVTTSRGIVREISEEELKKLCIIATEATEKVSPEEVVE
KIFRQDRTIALNKEMIKMGNKEIEIEKDLYDQKTNPSDFTKSLEKSAFTWKDLPKEERKK
LSSYFAAASKASELREVAQIECGESLENVSQSLHYQKWQKSCALRNEYAYQLKPFLAKAE
SRKVLADKSLYYIETHAKKHEDILKTQENKALEAEKMKDLNHQLVFHIEPLLYKLFPDGP
SKKTGREFRFGAKGSLLVNHTGDKAGQFYDFERGEGGGLLKLIGRELKLDKVEARKWAAE
FLGIVSEIKLPGSFNKPKSTPEKDSTWVSIKPDPKIPAPKFENHGKLHYYYKEVMRHAYH
DEKGDLLYYVLRLQNKEDLSQKSTPPLSYGYYKDNSEKLIWELRGYKDDQGKKPLYNLHH
LMEKPLAPVLVVEGEKTADKALEKFPDENFVCITWSGGAKNVDKTDWSPLFGREVVVWPD
NDEAGFKAAAQVCDELKKVCASKICMVERPQLFAKLPEKWDLADPLPEGIDSSSLSFHLM
DNRKDLLQNFVTEKIGSDQSSTTEKLRIGYLLYHFEKRIEGKIQEELSQDLSLSQKEQIW
RKYGMQAIDLLQQKDEISKEICSDPQVNASGKLAERLTFQMQLFNAKHGHPPKSHQILQM
KEAILEFTKDISFIKNSCADQDVKDLAIDRSLEPVCEKKLKGYEVSKDERHSFECAVRKE
TVAISKQRELEVIQNQTLAKQKSLEISRGPDLSL
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcaataggttttggccgcatagaattcattaagagatcagaaggaagaaatgcctgt
cagctttcggcttatctctctcgatctcgtatattctttgaagggaattgcgcgcttgaa
ccaaagctgtatgatttcagtcatcgcgaagatgtttatcatcacgaaatcatccttcct
gaaggtgcagatgaaaatcttagaaacccagaagttctttggaatcttgcagaaagaaaa
gaagtccgtaaagatgcacaagtcagtatgcatttggttcttgcgctgcctgatgataaa
gagatcactccagaggaacgagtcgaattagcaagcactttcatcaaaaagcactatgat
ggacttgttgcggaggttgtaatccatcctcctgagagaacgattgagtttacagaggaa
aatgaagctttgggtattcctaagggaatcgtaggaacagtgatcgagaagaaaggggag
aactacattgtttctcttccgaaaggagttagagcaaatccctttgtagaaattggagtg
aattatccaggtatgagtgttcaagagcataactggcatgcacatgcacagctatcgacc
cgtagacttaagtataacggcaaagagttcgaagactataaagctacagatctaatgcct
gtggttatgaaggggaaagtcgttgaaggtcttgacgttggaaagttatgggctcagcat
caaaatgaattctttctctcaaaaggattagccttacgagttgaagataatgggttgata
gctcaggagcatttaggcccagttcggatgagaggacgagcttatgctcttttagaagag
catgaaaaacggctcgaacttaacgctttagcatcaagtgatccaaaaaatattctagag
gcccttacagatagacagagcgtttttactaaggacgatgttgaacgtttcattctaaaa
catactccagctgataaagttcctgaagtgactgagcttttttggaagcaagaagagctc
gtgcatcttagagataaaaagactttagagttcgtctcaaaatttacttcaagagctgtt
ttaaatgaagaaaggcaaatcttgaggttggcggaccgtatctatgaaaaacctacaaaa
aacataccagaatcgattcaagaacagtttgataatacactgactaaagagcaaaaaagc
gcgtacaagaatattttaaatggtaaaggtctgtgctgcgttcaaggatatgctggtgta
gggaaaagttatcttttacaagctttgaagaatgcatatgaagagagaggtttaaaagtt
cgagcctttggtcctgataatgctacagccaatgtccttaatgaaaaaggcttttcgaat
gcagagaatctttatcgatttctatatagtcagaagcatgggttgagaaatatacataaa
gggttcgaagtttgggtcctagatgaagcaggaaaattagggaacaaaccgctgctagaa
tttctaaaacttgcagaaaaaaaaggagtaaaagttgttctcgcgggagacagtagtcaa
ttgccttcagttcaaaggggaggggcttttaagtttttttctacaaggtatcaaacagaa
gtattagaagatattcagcgacaaaaggatgaacttgctagatctatggctaaagatctg
gcaataggaaaagctggatcagctttagataagctttctgctatgggatcgattaagtgg
gccccgactaagaaagaagctatggaagatcttgtcataaaatgggcaattgaccatcga
gatacagaaaaaaatggatctagaaatgcatttgatagcagcattatcgtggctcataca
aattcggaagtacgtgcccttaatgaaatggttcgacttgtacgaaagcaaagaggagag
attagttctagagaatttagatgcgaggtagtctctggggaccaagataaagcctcaatt
tttatcagtgaaggagaccgtgtcgaatttcgaaaaaaagaccgtgaactaggtgttagt
aacggagacatgggggttttggtgcgagcagaaaaagatgaatttgttgttgcgattcaa
gaaaatggaaagaaaactcgcatggcaagatttgatccaagtagatatagaggatttcag
ttggggtatgcatcgactgctcaatgtgtacaggggagaaccgttgatcgggcctatatt
cttcattcaccctatctcaatcaacaaatggcttatgtcaagctgacaaggcatgttgac
aatgttacttattttgtatccaaagaagaagcctcaactctttctgatctaaaaagacag
gctttacgagatggctctaaaagtggagcttattgttatacagacaccgaagaaatcgaa
gaaaagttcctccttcaaaagaaggagtttgatattgaaacgcttagaaactcagatgag
tttaaatctcgttttaagggaataactcttcgagcttgggaagaagtaaagggaagagct
ctagattttattgggataaagcaagaccgatcccaagactcagttttttttagtttcaaa
ggagataacgtaacaacctctagaggaatcgttcgcgaaatttctgaagaagaacttaaa
aaactatgcattatagccacagaggctaccgagaaagtctctcctgaagaagtggtagaa
aagatctttcgtcaagaccgaactattgcattaaataaagaaatgattaagatgggaaac
aaagaaatcgaaattgaaaaagacctgtatgaccaaaaaacaaatccatcagactttact
aagagcctcgagaagagtgcttttacatggaaagacctgcctaaagaagaaagaaaaaaa
ctcagctcttacttcgccgctgcttcaaaagcctctgagcttagagaagttgcccaaatc
gagtgcggagaaagcttagaaaacgtttctcaatctcttcactatcaaaaatggcagaag
tcttgtgctcttaggaatgaatatgcttatcaattgaaacctttcttagctaaagccgaa
agtaggaaagttttagcagataaatctctctactatatcgaaactcatgcaaaaaaacat
gaggacattttgaaaactcaagagaataaagctcttgaggcagaaaaaatgaaagatctc
aatcatcaacttgtcttccatattgaaccgcttctatacaagctgtttcctgatgggcca
agcaaaaaaacgggaagagagtttcgttttggggcaaaaggctctctcttagtcaatcat
acaggtgacaaagctggacagttttatgatttcgaaagaggggaaggtggtggcttgctt
aagctaattggtagagagcttaaattagataaagtagaagctcgcaaatgggcagcagaa
tttttagggattgtgagtgaaattaagctgcccggttcctttaacaaaccaaagtccact
cctgagaaagactctacttgggtaagtatcaagcctgaccctaaaattccagcgccaaag
tttgaaaaccatgggaaattgcactactactacaaagaagtcatgcgacatgcttatcac
gatgaaaagggggatcttctctattacgttctacgacttcaaaacaaagaagacctctcg
caaaaaagtactcctcctctcagctatggctattataaagataattccgaaaaactcata
tgggaacttcgaggttataaagatgaccaagggaagaaacccctctacaacttacaccat
ttaatggaaaagcccctagctcctgttcttgttgttgaaggggagaaaacagcagacaag
gctttagagaagtttccggatgaaaatttcgtctgcatcacatggtctggtggtgcaaaa
aacgttgataaaacagattggagtccactcttcggaagagaagtggtcgtatggcctgat
aacgatgaggcgggctttaaagcagcagctcaagtctgcgatgaattgaagaaggtttgt
gcttctaaaatttgtatggttgaaagacctcagctttttgcaaagcttcctgaaaagtgg
gacttagcagatcctcttccagaaggaattgactcttcttctctatcatttcatttaatg
gataatcgaaaagaccttcttcaaaattttgtcactgagaaaataggatctgatcaaagt
agtacaaccgaaaagttaagaataggttatcttctctatcattttgaaaaaagaatagaa
gggaagattcaagaagaactatctcaggatctatcactatctcaaaaagaacagatttgg
agaaaatatggaatgcaagccattgaccttttgcagcaaaaagacgaaatttcgaaagaa
atttgcagcgatcctcaagtgaatgcctctgggaaactagctgaaagactcaccttccaa
atgcagctttttaatgcgaagcatggacacccaccaaaaagtcatcaaatcttgcagatg
aaggaagctattcttgaatttacgaaagatatcagtttcattaaaaacagttgtgccgat
caagatgtcaaagacctcgcaattgatcgaagccttgagcctgtttgtgagaaaaaactt
aagggatatgaagtctcgaaagatgagagacattcattcgaatgtgcagttcgcaaggaa
actgtagcaatttccaaacaaagagaattggaagtcattcaaaaccaaaccttggcaaaa
caaaagtctcttgagatttcaagaggaccagacctatctttatag
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