Salvelinus namaycush (lake trout): 120017438
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Entry
120017438 CDS
T07522
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120017438 (cfap43)
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
120017438 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML
WDR55
TPR_19
WD40
TPR_10
TPR_12
Beta-prop_WDR3_2nd
Beta-prop_HPS5
CFAP43_N
TPR_2
TPR_1
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_ACSF4
WDR90_beta-prop_4th
TPPII_C
Motif
Other DBs
NCBI-GeneID:
120017438
NCBI-ProteinID:
XP_038816112
UniProt:
A0A8U0P159
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Position
Sna22:21014731..21035700
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AA seq
1956 aa
AA seq
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MAQTSLKIRLQGLECHFTWKLDDSRSKLQSLRETMIDISSREGVQCSWTGHLYNLLAYLH
YALGSTEDALHCLKKAEEAIRLNSPDDVELSLVVHYGNLAWVHYHQGELTESETYVEKVG
RLLRDNPSSCPGVVWGERAWTLNKFDVSKRKAALYCFRMALKGDPENKVLRCGYAMAFNK
SVDRKDITPELRSEMLEHLRIARELEPEDLYITVMYLQRLAESGQVEEACKLAKEVIEKP
LDSFGGFGILLDFFKDYISHDSSIDLARRTLERHPNSRQLKRHLGKCYKWKIFSPEEKRN
PMRHILIENAVNLYEEVVTLYPKSLAVKLELTAMYKESGRIDRADKIFEDLLLEIEGMEP
QDLQKFYNWWAQGLTSQNVEFVDKKTACYICGNYIVFLNIETNIRSVLQCPGRGIGAFTA
NGHCRTLAFSNHKLNPSIFVYNYPELILKNELKGTAHVDYTSLALSDAGPYLACCSSIPD
HTITVWNWETGDPICNQPQAGKDITSLVFNPMNWLQICSLSASSSLTVWNIEKSDSFHIM
KPGVIDLPATDGCLVEREINPSHVPTGILTYFGPQMPTSAIAGLAEDKAETFVPKERIKT
RLRPSTICWTASSELYVGCQEGHLLQVDPDSLAVSVLFNPSAADDIPGFQQGSFQSLALH
KDGLFVSGKGRIYRYKRSQCEKVVKVLDVLSGDFVAAASLYTDNNLCVSVRDSGELQLWS
LDAGFCIGSISLQVTSLACCPIAQYVAVGTVSGHVLFIELTREQQPRLVHSVHLYYTPVD
HLLFDQGGNFLITGTSDANIYVLNARASREFEVIGYTGAKGAIVSLSTQYSRDIKQVKLL
ALCAGEKDIGRGEGSLLTLLTLPVQELTGAGVCADLRGCLSNNVLQRCTYEVPHALSSSA
LGANKIFGYCQKRKALQRFQLPESTEWSSDQEVVQLTPEKEVEGHPMGPASVLLSPHQSW
LASVGQDGLLRIREISSLDRYVQMQCHSCWLGGVRTVSFTSDSQTMITTGLKDGSMVCTR
LRLKMAGVGKANAATQYSQSIAKYQESVITSENPILSRMADWDPEALSPPGSADLHRAEV
AKANDKRQIVDVTEQDESSTNLPSATASDSTWLDNKLEAIQAMMRENETLPDMEKLEQQE
FNLDVDEQKRLQAEGEQEVTRVRNEIELENLAKCYLRDVLKRECWDSMKIKGQAIKAFHT
EHEVKNYPMKERTQQELDELHRVESMRKIEWADSNLQQEILEKNSKTTAEEEEEEEGREM
ESASLTGSLSAQYGGSNPYLYNQFNLHIREQKINQITLLQDVIYKVKTAFNTDFKGVHKQ
KEQEINRVKDKNRRIMEIMSELDLKRKLWEPSLSDNERPERALSVEDSEIHFEKYLTPEQ
RTKEEEKKKEEEQRRQTAKSDNIRERALDEMMGGVLELKKEDILRVEVPQPEFIVSKPDI
QWTEEEKKIYKEYEKKAKELSEEQEKYRKTLEAEMKKLQTSIMDSTQGFDETLTKLFERK
VKSEMVIYQEELKITNLVHSILIEEEVLNRERELSLKLEKNRVYKNEIGEELKKHKEDVE
MFRETYDNVVAEDKLLDRGFRKEFFDVPGHVVDQLYKLYKRRPRVQRMRTQADNSTSPFK
ERPLPGPVAAEGLCQMMKAMEELDAPENMPESLDLSVWERFCLARRAKVESEQQVKVKAL
TLAEMQAFLQKRTDEDESARLEMKSLMDDINGLREEKMRFRLDIMVQILIKQGQVEVENG
DFIADYSDSLLLHKSVVEDLNGTIRALGEQKIASMVECKDFRKGIIQQEWEHKRMRMQKE
DLNNKARDIQMLRVSQELQEYLSETDHDNRISKQVSTLEKTITLQEKTHQKNVLTCKKLI
KQLNRQAAMKAAKNSALDEQLTNMQVTVAERRHICEAIAMEENHESDAEERYQEIIQRKK
LVDLARTQAEEVATLRAEVERMRMKSFPALTQLKHN
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacctccttgaaaattaggctgcagggtttggaatgccacttcacctggaag
ctggacgacagcagatctaaacttcaaagcctcagagaaacgatgatagacatcagcagc
agagagggggttcaatgttcctggacgggtcatctgtacaacctcctggcttacctacac
tacgctttgggctccacagaggacgctcttcattgcctgaagaaggctgaagaggccatt
cgcctaaacagcccagacgacgtggagctaagtctggtggtccactatgggaacttggcc
tgggtgcactatcaccaaggggagctaacagagagcgagacctatgtggagaaggtgggg
agactattgcgggacaacccctcgtcctgcccaggtgtagtgtggggcgaaagggcctgg
actttgaataagtttgatgtaagcaagaggaaggcagcgctatattgcttccggatggcc
ttgaaaggggatcctgagaacaaggtgctgcgctgtggctacgccatggcatttaataaa
tctgttgataggaaagacattaccccggagctgcgatctgagatgttggagcacctacgg
attgctagagaattggaaccagaagatttgtacatcacagtgatgtacctgcagaggctt
gcagagagtggccaggttgaggaagcatgtaaacttgcaaaggaagtgatagagaagcct
ttggacagctttggtggatttggaatcttgctagattttttcaaagattacatctctcat
gattcaagcattgacctggcaagaaggaccctggagaggcaccccaattcacgccagctg
aagaggcatcttgggaagtgttacaaatggaagattttctctccggaagagaaaaggaac
ccaatgaggcatattctgattgaaaatgcagtcaacctttatgaagaggtggtcacactc
taccccaaatcccttgcagtaaaactggaactgactgccatgtacaaagaatctggcaga
attgatagagcagataaaatatttgaggacctgcttcttgaaatagaaggaatggaacca
caggatttacaaaaattctacaactggtgggctcagggtttgacaagccaaaatgttgaa
tttgttgacaagaaaacagcctgctacatttgtgggaattacatcgttttcctgaatata
gagacgaacattagaagtgtgctgcagtgtcctggtcgaggtattggtgccttcacagca
aatggacattgcaggacacttgcattctccaaccataaactaaatccctccatatttgtg
tacaactaccctgaacttattctgaagaatgaactgaagggaacagcccatgtagactac
acatctctggcactaagtgatgctggtccttatttggcctgctgctcatcaataccagac
cacaccataacagtatggaactgggaaactggggatccaatttgtaaccaaccacaagct
ggaaaagacatcacctctttggtgtttaacccaatgaactggctccagatttgctctttg
agtgcatcatcatcccttacagtttggaacattgagaagagtgacagctttcatataatg
aaaccaggtgtgatagatctccctgcgactgatggctgtctggttgagagggagattaac
ccctctcatgtccccactggaatactcacctacttcggacctcagatgcccacctcagcc
atcgcagggcttgcagaagacaaggcagaaacctttgtgcccaaagagcgcatcaagacc
aggctaagacctagcaccatctgctggacagcctcatcagagctctatgtgggctgtcag
gaaggccacctactgcaggttgacccagactctctggctgtctctgtcctcttcaacccc
tcagctgcagatgacattcctgggttccagcagggtagcttccagagcttagccctgcac
aaggatggactctttgtgtcaggaaaggggcgcatctacaggtataaacgatcccagtgt
gagaaggtggtgaaagtcctggacgttctcagtggagactttgtggcagcagcttcactg
tacactgataataacttatgtgtgtcagtgagggactcaggagagttgcagctctggtct
ctagatgctggcttctgcatcggctctatatctcttcaagtgaccagtttggcctgctgt
ccgattgctcaatacgttgccgtgggaacagtgtcggggcatgtcctgttcattgagctg
accagggagcagcagcctcgtctggtgcacagtgttcacctctactacactcctgtggac
cacctactttttgatcaaggaggaaacttccttatcactggtacctcggatgcaaatata
tatgtgttgaatgcaagggcttccagagaatttgaagtaatcggatacacaggtgctaaa
ggagccatcgtgtccctctctacccagtacagccgggacattaagcaggtcaaactgctg
gctctgtgtgctggagagaaggacataggccgaggggagggaagtctgcttacactgctc
actctgcctgtgcaggagctcacaggggcaggagtgtgtgcagacctgagaggatgtctt
tccaataatgtcctacagcggtgcacatatgaggtccctcacgcactcagctcctctgcc
ctgggagccaataagatctttggctactgccaaaagagaaaagctctccagagattccag
ctacctgagagcacagaatggtcctctgaccaggaagtggtccagttgaccccagagaag
gaggtggagggtcaccctatgggccccgcctctgtcctcctgtcgccccaccagtcttgg
ctggcctcggtgggccaagacggactgctgcgcatccgagagatctccagtctagaccgg
tatgttcagatgcagtgccactcgtgttggctgggaggggtgaggacagtgtcctttacc
tcagacagtcagacaatgatcactacaggcctgaaagatggctctatggtctgtacaaga
ctaaggctgaaaatggcaggtgttggcaaagcgaatgcagctacacagtacagccagtct
atagccaaataccaggagagtgtgataacatcagagaaccctattctcagtaggatggct
gactgggacccagaggccctgtcccctcctgggtctgcagatctacacagagcagaggta
gccaaggccaatgataagcgacagatagttgatgtgacggaacaggatgagagctccacc
aacctgccctcagccacagcctcagactccacctggctggacaacaagctggaagcgatc
caggcaatgatgcgtgagaacgagacgctgcctgacatggagaagctggagcagcaggag
ttcaacctggatgtagatgagcaaaagagattgcaagccgagggggagcaggaggtcacc
agggtccgaaatgagattgagttggagaacctagccaagtgctacctgcgtgacgtcctt
aagagagaatgctgggattccatgaagatcaaagggcaagctatcaaggccttccacact
gaacacgaggtgaagaactaccccatgaaggagcggacacagcaggagctggatgaactt
catagagtggagagtatgaggaagattgaatgggctgacagtaatctccagcaggagatt
ctagagaagaatagcaagaccacggcggaagaagaggaggaggaggaaggtcgtgagatg
gagagtgcttccctcacaggtagcctcagtgcccagtatggaggctcaaacccctacctc
tacaatcagttcaacctgcacatcagagagcagaagatcaaccagatcactttgctacag
gatgtcatctacaaagtgaagacagcctttaacacagactttaagggggtgcacaagcag
aaggagcaggagattaaccgagtgaaagataagaatcgtcgcatcatggagatcatgtca
gagctggacctcaagaggaagctgtgggagcccagcctgtctgacaacgagcggccagag
agggcactgtctgtggaggactctgagattcattttgaaaagtacctcaccccagagcag
agaacaaaagaggaggagaagaagaaagaggaggaacaaagacgacagacggccaagagt
gacaatatcagagagcgagctctggatgaaatgatgggtggagtactcgagctaaaaaaa
gaggacatcttgagagtggaggtgcctcagcctgagttcattgtatccaaaccggacatt
cagtggacagaggaagagaaaaagatttataaagagtatgagaagaaagccaaagaactg
agcgaggaacaggagaagtacagaaagactctggaagctgaaatgaagaaactacagacg
tccatcatggactccactcaggggtttgatgaaaccttgaccaagctctttgagaggaag
gtgaaatctgagatggttatataccaggaagagctgaagattacaaatctagttcactcc
attctgatagaggaggaggttctcaatagagagcgagaactcagcctcaagctagaaaaa
aacagggtctacaagaatgagattggagaagagcttaagaagcacaaagaggatgtagaa
atgttccgggagacctacgacaatgttgtggccgaggacaaacttctcgacaggggattc
aggaaggagttctttgatgtcccaggccatgttgttgatcagctgtacaagctatacaag
cgcagacccagggtccagaggatgaggacccaggcagacaacagtaccagcccctttaaa
gagcggcccctgccgggcccagtggcagcagagggtctctgtcagatgatgaaggccatg
gaggagctggacgctccagagaacatgcctgaaagcctagacttgtctgtgtgggagagg
ttctgcctggcccgcagagccaaagttgagagtgagcagcaggtgaaagttaaggctttg
actctggctgaaatgcaggcctttctgcagaaaaggaccgatgaggatgagagtgcaaga
ctggaaatgaaaagtctcatggatgacatcaatgggctacgagaggagaagatgcgtttc
cgcctggacatcatggttcagatcttgatcaagcagggccaggtggaggtggagaacgga
gacttcattgcggactactctgactctctgctgctccataagagtgtggtggaggacctc
aacgggaccatcagagctctaggagagcagaagatagccagcatggtggagtgcaaggac
ttccgtaagggcatcatccagcaggagtgggagcacaagaggatgagaatgcagaaggag
gacctgaacaacaaagccagggacattcagatgctgcgagtctctcaggagctgcaggag
tatctcagtgagacggatcatgacaaccgcatatcaaagcaggtttcaactctggagaaa
accataacattacaggaaaagactcaccaaaagaatgtgctgacctgtaagaagttgatc
aagcagctgaacagacaggcagcaatgaaggcagcgaagaattctgctctggatgagcag
ctgaccaacatgcaagtgactgtggctgagaggaggcacatctgtgaagccatagccatg
gaggagaaccatgagagtgatgcagaggagaggtaccaggagatcatccagaggaagaag
ctggtggatctagccaggacccaggctgaggaggtggctaccctcagggcagaggtggaa
cgcatgaggatgaagtccttccccgctctcactcagctaaaacataactga
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integrated database retrieval system
