Salvelinus namaycush (lake trout): 120017452
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Entry
120017452 CDS
T07522
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120017452 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017452 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
snh02044
]
120017452 (sec31b)
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120017452 (sec31b)
Secretion system [BR:
snh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120017452 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
TPR_Sec16
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Prp18
Beta-prop_DCAF12
MukF_M
Motif
Other DBs
NCBI-GeneID:
120017452
NCBI-ProteinID:
XP_038816130
UniProt:
A0A8U0P0W4
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Position
Sna22:1694619..1721653
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AA seq
1274 aa
AA seq
DB search
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLDMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGTVTVYSPEAIVTSGEEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQPPEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRMPVI
QMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQIGMQSLCGTLPQI
SSSFDTMDPFGTGQVLPPLQVPQATPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFES
PKAPVQSPQPVPVPRQVFVSQVTTETELLQRSRELQAALQSGSLSDYCQAKIHKAPTDSE
QDIWKFLLVNFEDEARVKFLRLLGFSKVDLERKISTCLGKNLQPNGHGVDANDLAEKIQL
LSTQRSEESGDAVDSTKTPGSSSPSDFFSQIPPQPQDKEKISFQIPVSADADGLISQALL
VGNFEGAVDLCLSDGRYAEAILLAISGGQELLQKTQQTYLDKQRNSISMLISSVVTQNWG
DMVQSCDLDNWKEALAALLTYAHPKQFAHLCETLGSRLEGERTEKRCLQACLCYICSGNI
EKLVECWALQRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVVVQSPILADKLTHYAGLLA
SQGSLATALSYLPDSSDQACIMMMRDRLFHAQGGGGAAGGQQPPPFPYNVVRVTGGDPDP
AQAPAVPAQAQPPAQTTQTPGPYQPPLPVMPVAGQPPMTTVFTPQAFTNSRGPPPPSYGG
LPPSSHAPPPSGLPRTGLRPAYPQHPATTPGFSPLQPFQPQQQPMSAGLGGPGLSAFPPG
PTMPGSNLSGPPLPPFSAPGSLPTMPSPGLPPSGFTPTSLPSGPMPPSYQQPGAPVGMYP
PGGSHLHSQGPPAGPPSGPYPPLGPGYPQGGPGAPAVKSFSAPSVAPPPTGQDGWNDPPA
VRGGSRKKKVIPDNYTPPAPITAPVMGGYPMEGHHQPQGQQGHDPSRTQQGHDPSRTQQF
PPGAPQEPSVQLLQALPAERVEQREIPAEHMVLKQTFDSLVQRCQLAAQDPQTKRKLDDA
SKRLGYLYDKLREQTLSNNILGGLHEISRCVAGKNYQRGLEVHTAVVTSSNFSEIQAFMP
ILKVVMTIANKLGV
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaagagatccagaggacagctcatccagcatggagtcctgccccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcgttcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctggacatgaaactcaag
gggtccctacctacttctaacaggctgcatagtctggtgtgggtaaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcacggtaacggtgtat
agcccagaagccatcgtaacatcaggggaagaggcaattataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcgtcaggg
gcaaacgattcagagatctacatctgggatctgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagcctcctgaagatatcagtgtagtgtcgtggaacagacaggtccaa
cacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctgaggaagaac
gagcccatcatcaagattagtgaccacagcaaccggatgcactgttcagggatgctctgg
caccctgaggtggccacacagttggtcctggcctcagaagatgaccgcatgccagtcatt
cagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaaccacacaagg
ggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagtagtgctaaa
gacaacaggatcctctgctggaacccaaacactggagaggtgatctatgaattaccaacc
accaaccagtggtgctttgacatccagtggtgtcccaggaacccagcgctgctgtcggcg
gcctcgtttgacgggtggatcagtgtttacagcgtgatgggaggaagcctggaggcccag
cagcagagcagggctgatcagattggaatgcagtctttgtgtggtactttgccacagatc
tcctcgtcctttgacaccatggatccatttgggacaggccaggtgctgccccctctgcaa
gttccccaagccacccctcagaccaccctggtcgctccgctgaagaagccccccaagtgg
gttcgtaggcccgtaggagcctcattcgcttttggtgggaagctgatcacctttgagagt
cctaaggctccagtccagagcccacagcccgtccctgtccccaggcaggtgtttgtgagc
caagtcaccacggaaacagagctcctccaacgttccagggagctgcaggctgctctgcaa
tctggatccttgtcagactactgccaggccaagatccacaaggcccccacagactctgaa
caggacatatggaaatttctcctggtcaactttgaagatgaagcccgggtcaaattcctg
agacttttgggtttcagcaaagtggatttagagagaaagatatccacctgcttggggaag
aacctgcagcctaacggacatggagtggatgccaacgatctggctgagaagatacagctc
ctctctactcagaggtcagaagaatctggggatgcggtcgactccaccaagactccgggt
tcatcctccccatctgactttttcagtcagatcccaccacaaccacaggacaaggagaag
atcagcttccaaatccctgtctcagcagatgcagatggtctgatcagccaggctctgctg
gtgggaaactttgagggagcggtggatctgtgtctgagcgacgggcgatacgctgaggcc
atcctgctggctatcagtggaggacaggagctactgcagaagacccagcagacatacctg
gacaagcagaggaacagcatctctatgctgatctcatccgtggtgacccagaactgggga
gacatggtgcagagctgtgacttggataactggaaggaggccctcgctgctcttctgacc
tacgctcatcccaaacagtttgctcatctgtgtgagaccctggggtcgcgtctggagggg
gagaggacagagaaacgctgtctgcaggcatgtctctgttacatttgctctgggaacatt
gaaaaactagtggaatgctgggccctgcagagggactgctcatctcccctggttttagag
gacttggtagagaagatgatggttctgcgtaagtctgtggagcgtctgaggaacagcgag
gtggttgtacagagtcctatcctggctgacaagctgactcactatgctggtctcctagct
tcacaaggcagcctggctacagccctgtcctacctgccagactcctcagaccaggcttgc
atcatgatgatgagagaccggctgttccacgcccagggagggggaggagcagcggggggt
caacagcccccaccgttcccttacaacgtagtcagggtgacggggggcgaccctgacccc
gctcaggcccctgctgtccccgcccaagcacaaccaccagcacagacaacacagacaccg
gggccctaccagcctccacttcctgtgatgccagtggctggccagcctcctatgactaca
gtcttcactcctcaagcttttactaactccagagggccacctcctccttcgtatggtggt
ctgccaccctcctcccatgctcctccacctagtgggctgccacgtacaggactacgacca
gcctaccctcaacatcctgccactaccccagggttctctccactccagccattccagcca
caacagcagcccatgtctgcaggactaggtggccccggcctctctgccttccctccagga
cctactatgccaggctccaacctgtctggacctcccctgcctcccttctctgcccctggc
agcctccccaccatgcccagcccagggctacctccgtcaggcttcacccccacctcgctc
ccttcaggccccatgccacccagctaccagcagcctggggcccccgtcggcatgtaccca
ccaggggggtctcaccttcacagccagggccctcctgcaggtcccccctctggtccgtac
cctcccctgggacctgggtacccacaaggaggtcctggagccccggccgtcaagtccttc
tctgctccgtcggttgctcctcctcctacaggacaagatggctggaatgacccaccagca
gtacgagggggttctaggaagaaaaaggttatcccagacaactacacccctcctgctccc
atcaccgcccctgttatggggggttaccccatggagggccatcatcagccccaaggacag
cagggccacgaccccagtcgcacccagcagggccacgaccccagccgcacgcagcagttc
ccccctggggcccctcaggagcccagcgtacagctcctccaggcgctgccggctgagagg
gtggagcagagagagatccctgcggagcacatggtcctcaagcagaccttcgacagcctg
gttcaacgctgccagctagccgcacaagacccacaaacaaaaagaaaacttgacgatgca
tcgaaacgccttggttacctgtatgacaagctgagagagcaaacgctgtctaacaacatc
ctggggggtttacatgagataagccgctgtgtggcgggcaagaactaccagcgtggccta
gaggtccacactgctgtggtcaccagcagcaacttcagcgagatccaagccttcatgccc
atcctcaaagtggtcatgaccatcgccaacaagctgggcgtctga
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integrated database retrieval system
