Salvelinus namaycush (lake trout): 120017474
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Entry
120017474 CDS
T07522
Symbol
habp2
Name
(RefSeq) hyaluronan-binding protein 2 isoform X1
KO
K08648
hyaluronan binding protein 2 [EC:3.4.21.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120017474 (habp2)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120017474 (habp2)
Peptidases and inhibitors [BR:
snh01002
]
Serine peptidases
Family S1: chymotrypsin family
120017474 (habp2)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120017474 (habp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
hEGF
EGF_2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
120017474
NCBI-ProteinID:
XP_038816171
UniProt:
A0A8U0P1I5
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All DBs
Position
Sna22:complement(5255736..5267510)
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AA seq
623 aa
AA seq
DB search
MNSKPLFFCLFLVLLILPVQLHKQEKHGKHPKQEKHTKKPERKYRRHEDILKDPFFEIVD
EPGEDDSDDPDWLYELQEPDGQCNPNPCLNNGVCEEKGKRRFKCDCPKPFKGKKCQKGPK
RCNRGTCGRGECVLTSKPPFYACKCKQPFLPPDCKSLAVCQPNPCKNGGLCVKDGMDFDC
LCPEGFSGRFCNVGPDDCYKLKDDGESYRGNVSETDDGEECLYWNSHFILEKGSDPFNDF
EDDDGLGPHNFCRNPDGDTQPWCFIRRGRVLLWDHCGVRECAKPTAMVTTDAGPKPTTGP
KPTTTTTTTTKPTTRPKPTTTTTTTTPKPKPTPAKPSAGPEKPTAPKPSGVPRQTTASPT
SDKQFTSCGKPQPKKAITRIYGGLKAVPGAQPWQLSLQVRPKGSSQAYRHICGAVLIDSC
WALTAGHCIDPKDQMQVVAGSLTLGKDVPIGQTITVEKATRHENYKETSRAVYNDIAVLK
LKATDGRCARESQFVKAACLPNSTFSDGTECTISGWGATEDSDNGSNHLLDAQVLLISQE
SCSSSKVYGSAIDNTMFCAGYQQGGVDSCQGDSGGPLTCNKEGSHFIYGIVSWGDQCGLK
NKPGVYARVSHYLDWIKSKTQAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaagcctcttttcttctgcctcttccttgtattgctcattctacctgttcaa
ttacataaacaagagaagcatggaaaacatccaaaacaggaaaaacacaccaaaaaacct
gaaagaaagtacagaagacatgaggatattctgaaggacccattctttgagatcgtagat
gaaccaggtgaggacgatagtgatgaccctgactggctttatgaactccaagaaccagat
ggccaatgcaacccaaacccttgcctcaataacggtgtgtgtgaggagaagggaaagaga
aggttcaaatgtgactgccccaagccattcaagggcaagaagtgccagaaagggcccaaa
aggtgtaataggggcacgtgtggccgtggcgagtgcgtgttgacctctaaaccacctttc
tacgcgtgcaagtgcaagcagcccttcctgcccccagactgcaaatcacttgcggtgtgt
cagcctaacccctgtaagaatggaggcttgtgcgtcaaggacggcatggactttgactgc
ctctgcccagaaggcttcagtggacgtttctgtaatgttggcccagatgactgttacaag
ctcaaggatgacggggagtcatatcgcggcaacgtgagtgagacagatgatggagaggaa
tgtctctactggaactcccatttcatcctggagaaaggctctgatcccttcaatgacttt
gaggatgacgatggactaggccctcataacttctgcagaaacccagatggtgacactcag
ccatggtgcttcataagaagagggcgggtgctgctgtgggatcactgtggcgtcagggag
tgtgctaagcccacagccatggtcacaacagatgctggtcccaagcctacgactggtccg
aagcccactactacaactactacaactaccaagcctactactcgtcccaaacccactact
acaactactaccacaacacccaagcctaaaccaacaccggccaaaccctcagcaggtcca
gagaaacctacagcgccaaagcccagtggagtcccacgacagaccacagctagccccacc
tctgataagcagttcaccagctgtggaaagccccagccgaagaaggccatcaccaggatc
tacggaggcttgaaggccgtccctggagcccagccctggcagctatccctgcaggtccga
cccaagggctccagccaggcatacaggcacatctgtggagcggtgctcatcgatagctgc
tgggccctgactgccggccactgcattgatccaaaggaccagatgcaggtggtggctggg
agtctgactctaggaaaggatgtgcccattgggcagacgatcacagtggagaaagccaca
cggcatgagaattacaaggagacatccagagctgtttacaatgacatagcggtgctgaag
ctgaaagccacagatggtcgctgtgccagagagagccagtttgtgaaggcagcctgcttg
cctaatagcacattctctgatgggactgaatgcaccatctctggatggggcgctactgag
gactctgacaacggctccaaccacctactggatgcccaggtgctgctgatcagccaggag
agctgctcaagcagcaaagtctatggaagcgccatagacaacaccatgttttgtgccggt
taccagcagggaggagtggactcctgccagggtgactctggagggccgctgacgtgtaac
aaggagggctcccatttcatctacggcatcgtgagctggggagaccagtgtgggttgaag
aacaagcctggggtctacgcacgggtctcccactaccttgactggatcaagtcaaagaca
caagcagcatag
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