Salvelinus namaycush (lake trout): 120017519
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Entry
120017519 CDS
T07522
Symbol
csgalnact2
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh01100
Metabolic pathways
Module
snh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120017519 (csgalnact2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120017519 (csgalnact2)
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
120017519 (csgalnact2)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120017519 (csgalnact2)
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120017519 (csgalnact2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
120017519
NCBI-ProteinID:
XP_038816255
UniProt:
A0A8U0THW4
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Position
Sna22:complement(8646028..8657573)
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AA seq
539 aa
AA seq
DB search
MPRQSFPLQGRMRWLFLGLVLLLVLFLFAYLLECTPPADVSLVLPGLGGESYGKEYYKAL
LQEQEEHHLSRAASLKRQIAQLKQELQQMSEKLKVLQDRKEGLGVQGLAETKGQVPGDLL
EFLHSQIDKAEVNTGARLPSEYALVPFESFNSGKVYQLEMGLTRHPEEKPVRKDRRDELV
EVIEAALDVINNPDEEDGQEDDVPMQRQMYTESHFTEGLYRTERDKGTLYELFFAKEDSD
IFRHVTLFRPFGPLMKVRSTSVETSGVVINIIVPLAGRTEAFSQFLHNFREVCIKHDRGV
HLTVVYFGQEGLREVKSYLERMSREESFSNYTLIPVDEEFSRGRGLDVGARAWKKGDVLM
FFCDVDIYFTLDYLNTCLLHTAPNKRVFYPVVFSLYNPAIVYGNLELVPPIESQLIHKKD
AGFWRDFGFGMTCQYRSDFLNIGGFDLEVKGWGVEDVHLYRKYLRSDLIVTRTPVSGLFH
LWHEKQCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIENHLRKQAYKTQGNTED
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcaaagctttccgctgcagggacggatgcgctggctgttcctggggctcgtc
ctgctgctggtcctcttcctttttgcttacttgctggagtgcactcccccagctgacgtc
agcctggtcctgcctggcttgggaggggagtcctatgggaaggagtactacaaggccctg
ctgcaagagcaggaggagcaccacctcagccgtgccgccagcctcaagcggcagatcgcc
cagctcaagcaggagctccagcagatgagtgagaagctcaaggtcctgcaggacaggaag
gaaggcctcggggtccagggactggctgagaccaagggccaggtgcctggggatctcctc
gagttcctccactcccagatcgacaaagccgaggtgaacacgggggcacggctgcccagc
gagtacgccctggtccccttcgagagcttcaactccggtaaggtgtatcagctggaaatg
gggttgaccaggcacccagaggagaagcctgtgcggaaggaccgcagggacgagctggtc
gaggtcattgaggcggccctggacgtcataaacaacccagacgaggaggatggccaggag
gatgatgtgcccatgcagaggcagatgtacactgagagccactttactgaggggctgtac
agaacagaacgggacaaaggcacgctctacgagctcttctttgcaaaagaggactccgac
attttccgccacgttactcttttccgtccattcggtcctttaatgaaagtcaggagcacg
tccgtagaaacatccggagtcgtcatcaatatcattgtgccactggcgggcagaacagag
gcattctcacagttcctacacaacttcagggaagtttgcataaaacatgataggggagtg
catcttacggtggtctactttggacaagagggcttacgagaggtgaagtcttatttggaa
agaatgtccagggaggagagtttttccaactacaccctcatcccagtggacgaggagttt
tccaggggcaggggtctggacgtcggagcccgcgcctggaagaagggtgacgtattgatg
ttcttctgtgatgtggatatctacttcacactggactatctcaacacctgcctccttcac
accgctccaaacaagagagtattttatccagtggttttcagtttgtataatcctgccata
gtctatggaaatctggagctggttccccccattgaaagtcaacttattcacaagaaagat
gctggattctggagagattttggctttggaatgacatgtcagtatcgctcagacttcctt
aatataggaggttttgacctggaagtgaaaggttggggtgtggaagatgtccacttgtac
aggaagtacctgcggagcgacctgatcgtgacgcgtacgccagtatctggcctcttccac
ctgtggcacgagaagcagtgtgcagacgagctgactccagaacagtatcgcatgtgcatc
cagtccaaagccatgaatgaggcgtcccactcccacctgggcatgctggtgttccgtgag
gagatcgagaatcacctccgcaagcaggcctataagacccagggcaacactgaagactga
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