Salvelinus namaycush (lake trout): 120017611
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Entry
120017611 CDS
T07522
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120017611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017611
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120017611
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
120017611
NCBI-ProteinID:
XP_038816416
UniProt:
A0A8U0NZU4
LinkDB
All DBs
Position
Sna22:complement(16080024..16160365)
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AA seq
1873 aa
AA seq
DB search
MVDKNIYIVQGEIITVVSAIKRNSRWNTHTPLDEEQDPLLHSFSHLKETLNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEVRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPRPPHHM
VRSASGGLEQAPPATLSNNNLTGGVLFIEQVSLSVPDSMASSMSSPTDSGLDTCSKATSR
EDLTDLDQSSSVATTPGTATSPSTEPGCLDAQSEGRQVHRAQSASVESIPEVLEDRDSVT
EQSDSASIHDMDYVNPRGVRFTPQQTQRDGEDGAALIPYGLPCLRELFRFLISLTNPHDR
HNTDAMMHMGLQLLTVALEAAHIAPYQSLLGLVKDELCRHLFQLLNVDRMNLCTASIRAC
FLLFESMRGHLKFQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLWRIPSFVTELYI
NHDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNST
AQQDQSAETVLAGGEGSTNDRVDTTTEAGRQVNRANGQNVPEADSVPLPPTSGHLMAEKM
ILGRQDQEETEPSAEKKESTKPQRFSSCLPDSQELLDIRNKKKLLNSGTEQFNQKPKKGI
QFLQEKGLLSSPMDNNEVAQWLRENPRLDKKQIGEFISDRKHMELLDSFVNTFTFQGLRI
DEALRLYLEAFRLPGEAPVIHRLLETFTDTWHKVNGSPFMTNDAGFALAYAVIMLNTDQH
NNNVRKQNIPMTVEQFKKNLKGVNGNTDFDQDMLEDIYNAIKNDEIVMPDEQSGLVKENY
VWSVLLHRGATSEGVFLHVPAGSYDHDLFTMTWGPTIAALSYVFDKSLDDAIVQKAIAGF
RKCAMISAHYGFSDVFDNLIISLCKFTTLSSESAENLPTVFGSNGKAQVAAKTVFHLAHR
HGDILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLS
FVNWLTLSGAEQSGLRGPSTENQEAKQAAMLCIKQCDPEKLITESKFLQLESLQELMKAL
ISVTPDEETYDEEDAAFCLEMLLRIVMENRDRVSCVWQTVRDHLCHLCVQATESCFLVER
AVVGLIRLAIRLLRREDISSQVLLSLRLLLMMKSHVLARVSREVAYGLHELLKTNAANIH
CADDWFTLFSLIECIGAGIKPPASFQVTSTSPDIDTGAQSDSELSSHHHSEVSLDRGYTS
DSEVYTEHGKSRMPRSVTDVDVASSGWLVVGKDDLDINKVPVSGSKPLLNPLVNQYSLTL
GQDMGFHDTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTHEKKK
NHKYDSQKSRVRRKPREKEGASRRAKASSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDL
LDLMHTLHTRAASIYSSWAQEQRHLEVAGKKIEADSQTLWTSCWCPLLQGIAWLCCDARR
QVRMQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMR
ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVM
DTAGIFHSVDSRTGYSDLWEITWERINCFLPNLREELFKQTVIPQPDPAPSPPVELAQPA
APSPPASPPPAQAPSPVPAAPTEPKTSSRPASPQDPPPPSANGTDRSSPVPPSTPPMRTP
VKMSPQISTPLSHSHMSQSPLILQPLASHLQVGGVPPMALPIILNPALIEASSPVPLLPA
PRPTDLSDTPEVK
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaagaatatatacattgtccaaggggagattattactgttgtaagtgccatc
aagaggaattcaaggtggaatacccacactcctttggatgaagaacaagatccattgctt
cacagcttcagccatctgaaggagactctcaacaatataaaagagctgtcagatgtggag
cctaacgtattcctgcggcccttcctggaggtggtacgatctgaagacaccaccggacca
atcacaggcctggccctcacctctgtcaacaagttcctgtcctacggcctcatagatgct
aaccatgaggcggcagcggaggccattgagaacatggcagatgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtggtgctcatgaaaatcctacaggtcctg
aggaccttgctgctcacgcccgtcggagcccacctgaccaacgagtctgtgtgcgagatc
atgcagtcgtgtttccgcatctgcttcgaggtgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtagacatggtgcagctgctgttctccagactaccccaatttaaa
gaagaggccaaaagttttgtgggtgctaacatgaagaagctgaagatgcgtgctggtggg
atgagtgagtcatcaaagtggaagaagcagaagcgctcgccccggcccccccatcacatg
gtacgaagcgcctcgggcggattggagcaggcccctcccgccacccttagcaacaacaac
ctcactggtggtgtccttttcatcgagcaggttagtttgtctgtcccagacagcatggcc
tcttccatgtctagccccacagacagcggccttgacacttgctccaaggccacctccaga
gaagacctgacagacctggaccagagcagctctgtcgccaccaccccaggcacagcaact
agcccttccacagagcctggatgcctggatgctcagtctgaggggaggcaggtgcatcgt
gcccagtcagcttcggtggagtccatccctgaggtcctggaggacagagactctgtgacg
gagcagtcagactcagcctcaatacacgacatggattacgtcaacccccgaggtgtccgc
ttcacaccacagcaaacacagagagacggtgaggatggtgcggctctcatcccctacggt
ctgccctgtctgcgggagctcttccgcttcctcatctcgctgaccaacccccatgaccgc
cacaacacggatgccatgatgcacatgggcctgcagctgctgaccgtggctctggaagca
gcccacattgccccctaccagtcactgctgggtctggtcaaagacgagctctgcagacac
ctcttccagttgctaaatgtggaccgtatgaacctgtgtaccgcctccatacgagcctgc
ttcttgctctttgagagcatgcgaggacatttgaagtttcagcttgagatgtatctgaag
aagctgatggacatcatcacgtcagagaacatgaagatgccttatgagatgaaggagatg
gccctggaggccctggtgcagctctggaggatccccagcttcgtcaccgagctctacatc
aaccacgactgtgacttctactgctcaaacctgtttgaagacctcaccaagctgctctcc
aagaatgccttccctgtgtccggacagctctacacaactcacctcctctcactagaggcc
ctactgactgttattgacagcactgaggcccactgccaggctaaggtgctcaacagcaca
gctcagcaggaccaatcagcagaaactgtgttggcgggaggagagggctcaaccaatgac
cgtgtagacacaaccacagaagcaggcaggcaggtgaaccgtgccaacggtcagaatgtt
ccagaggctgacagcgtgccccttccacctaccagcgggcacctaatggcagagaagatg
atactgggcagacaagaccaggaagagacagagccatctgctgagaagaaagaatcgaca
aagcctcaacgcttctcgtcttgtttacctgattctcaagagctgttggacatcagaaat
aaaaagaagctgctgaacagcggcacagagcagttcaaccagaagcctaagaaaggcatc
cagttcctgcaggaaaagggtctcctcagcagccccatggacaacaacgaggtggcccag
tggctccgggagaacccccgcctcgacaagaagcagatcggagagttcatcagtgaccgc
aagcacatggagctactggacagcttcgtcaacacgttcactttccaaggactgcgtatt
gacgaggcgctgcgtctgtatctggaggccttcagactgccaggagaggctccggtcatc
catcgacttttggaaaccttcacagacacctggcataaagtgaacggctctcccttcatg
accaacgacgcgggcttcgccctggcctacgctgtcatcatgctcaacacggaccagcac
aacaacaacgtgcgcaagcagaacatccccatgactgttgagcaattcaagaagaatctg
aagggtgtgaatggaaatacagacttcgatcaggatatgctggaggacatctacaatgca
atcaagaatgacgagatagtgatgccagacgagcagtcaggcctggtgaaagagaattac
gtgtggagcgtgctgctccaccggggggccacctccgagggggtcttcctccacgtgccc
gccggcagctatgaccacgacctgttcaccatgacctgggggcccaccatcgctgccctc
tcctacgtcttcgacaagagcctagatgacgccatcgtccagaaggccatcgctggcttc
cggaaatgtgccatgatatcagctcattatggattcagtgacgtgtttgataatttgatc
atctccctctgcaagtttacaacgctcagcagcgagtcggcggagaacctgcccacggtg
tttgggagtaacgggaaggcccaggtagctgctaagaccgtgttccacctggcccaccgg
cacggtgacatcctgagggagggctggaagaacatcatggactccatgctgcagctgttc
agagccgagctgctgcccaaggccatggtggaggtggaggattttgtggagccaaatgga
aagatttcgcttcaaagagaagagacgccttcaaatcggggcgagtctgcggtgctgagc
tttgtgaactggctgactctgagtggagcggagcagtctggtctacgtgggccctctact
gagaaccaggaggccaagcaggcagcaatgctctgtatcaagcaatgtgacccagagaag
ctgatcacagagagtaaattcctgcagctggagtctctacaggagctgatgaaggctctg
atctcagtcacacctgacgaggagacgtatgatgaggaggacgcggctttctgcctggag
atgctgctacgcatcgtcatggagaacagggaccgcgtgtcgtgtgtatggcagacggtg
cgggaccacctgtgccacttgtgtgtccaggctacagagagctgcttcctggtggagagg
gccgtggtgggcctcatcagactggccatccgcctgctgcgcagagaggacatcagctca
caggtgctgctgtccctgcgtctcctgctgatgatgaaatcacacgtcctggcccgggtt
agccgggaggtggcctacggcctccatgagctgctcaagaccaatgctgccaacatccac
tgcgcagacgactggttcaccctcttctccctaatcgagtgcatcggggccgggatcaaa
ccgcccgcctccttccaggtcacctccaccagtcccgacatcgacacaggtgcccagtcg
gacagtgagctgtcgtcccaccaccacagcgaagtgagtctggaccggggctacacctcc
gactctgaggtctacacggagcacggaaagtccaggatgccccgctctgtcactgatgtg
gacgtggccagcagcggatggctggtggttggtaaagatgacctggacatcaacaaggta
ccggtctctggctccaagcccctgctcaaccctctagtgaaccagtacagcctgaccctg
ggccaagacatgggcttccacgacaccaagtccctcatcaagtgtgtggagtccctctcc
ttcatagtacgcgatgctgcacatgtcacccctgaaaactttgagctgtgtgtcaaggcc
atccgggtgtttgtggaggccagccttaacggaggctacaggacccatgagaagaagaag
aaccacaagtacgactcccagaagtcccgtgtgaggaggaagcctcgggagaaagagggg
gcatcccgccgcgccaaggcctccagccagaggccctcccgttcccatagcgacgacgag
gaggacgagggagtcccggccagctaccacacggtgtcattacaggttagtcaggacctg
ttagacctgatgcacacgctgcacacgagggccgccagcatctacagctcctgggcacag
gaacagcgccacctggaggtcgcagggaagaagattgaggctgactcccagacactgtgg
accagctgctggtgcccacttctccaagggatagcctggctgtgctgtgatgccaggcgg
caggtgcgaatgcaggccctgacctacctccagagggcactgttggttcatgacctgcag
acactagatgctgtggagtgggagtcctgcttcaacaaggtcctgttccctctgctgacc
aagctgctggacaatattagccctgcagatgtgggaggcatggaggagaccaggatgagg
gcctgcaccctgctgtcaaaggtgttcctgcagcacctctctcccctgttgtctctgccc
accttcgctgccctgtggctcaccatcctggacttcatggacaagtacatgcacgctggt
tccagtgacctactgctggaagccattccagagtctctgaagaacatgctgctggtgatg
gacacagcaggaatcttccacagcgttgactcccgtacgggatactctgacctgtgggag
atcacctgggaacgcatcaactgcttcctgcctaacctccgggaagagctctttaaacag
acagtcataccccaaccagatcctgctcccagtcccccagtggaacttgcccagccggct
gccccctcccccccagcctcgccacccccagctcaggccccatctccagtgccagctgcc
cccacagagccaaagacctccagcagaccagcgtcgccccaagatcccccaccacctagt
gccaatggaactgacagatcatctccagtgcccccatcgactccccccatgcgcacccca
gtgaagatgtccccccagatctctacccccctgagtcactcacacatgagtcagtccccc
ctcatcctgcagcccctggcctcccatctgcaggtggggggcgtgccccccatggccctc
cccatcatcctcaaccccgccctcattgaggccagctcccctgtccccctgctccctgcc
cccaggcccaccgaccttagtgacaccccggaggtaaaatag
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