Salvelinus namaycush (lake trout): 120017635
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Entry
120017635 CDS
T07522
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120017635 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120017635 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
snh03016
]
120017635 (eef1a1a)
03012 Translation factors [BR:
snh03012
]
120017635 (eef1a1a)
04131 Membrane trafficking [BR:
snh04131
]
120017635 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120017635 (eef1a1a)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120017635 (eef1a1a)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120017635 (eef1a1a)
Translation factors [BR:
snh03012
]
Eukaryotic type
Elongation factors
120017635 (eef1a1a)
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120017635 (eef1a1a)
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120017635 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
120017635
NCBI-ProteinID:
XP_038816467
UniProt:
A0A8U0P1D6
LinkDB
All DBs
Position
Sna22:complement(18021605..18031346)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagctccacatcaacattgtggtgatcggccacgtggactctggcaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgaa
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcatcaccattgacatctcactgtggaaattt
gagaccagcaagtactacgtcaccattatcgacgcccccggacacagggacttcatcaag
aacatgatcactggaacatcccaggcagactgtgccgtgctgattgtggcagccggtgtg
ggtgaattcgaggccggcatctcaaagaacgggcagacccgcgagcacgccctcctggcc
tacaccctgggggtcaagcagctgatcgtgggcatcaacaagatggactccactgagccc
aactacagccagaagcgttatgaggagattgtgaaggaagtcagcacctacatcaagaag
attggctacaacccggatacggtagcctttgttcccatttctggctggaacggagacaac
atgctggaggccagtcctaatatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgctattcagcccccgtcccgc
cccaccgacaagcccctccgcctacccctgcaagatgtctacaagattggaggtattggc
acagtgcctgtggggcgtgtggagacgggcatgatcaagccaggcatggtggtgaccttt
gcccctgttaatgtgaccactgaggtgaagtctgtggagatgcaccacgaggccctgacc
gaagcaatgcccggagacaacgtgggcttcaatgtcaagaatgtgtctgtcaaggacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagcagtcttc
actgctcaggtgatcatcctgaaccacccagggcagatcagtgctggctatgccccagtg
ctggactgccacactgcccacatcgcctgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaagctggaggacaacccaaaggctctgaagtctggagacgccgcc
attgtggacatggtcccgggaaagcccatgtgtgtggagagcttctcagagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagactgtggcagtcggggtgatcaagggt
gttgagaagaaagccccctccactggtaaggtcaccaagtctgcccaaaaggcccagaag
accaaatga
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