Salvelinus namaycush (lake trout): 120017637
Help
Entry
120017637 CDS
T07522
Symbol
rin2
Name
(RefSeq) ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017637 (rin2)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120017637 (rin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
Lpg0393_VPS9
RA_3
SH2
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
120017637
NCBI-ProteinID:
XP_038816469
UniProt:
A0A8U0P341
LinkDB
All DBs
Position
Sna22:complement(18073739..18139209)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSTSTLIPPSLREKKGSFFKLIDSFAWEIGTLKREVVQKAEPAERDPEPVILQGLDGEVG
GLFLQAPPCVGVGARLAGARDSGYDSLRRRMSVLDRLVQTHVVWLQLGLNHADSTSILEP
QPTGTFLVRKSTTLQRKVISLRMHQDSETPVKDFPVKESQYTFSLEGSGLGFADLFRLVA
FCCISRDVLPFTLKLPEAISAARTPTDLEEVAKLGVGFWDSEHCCRSRSSVSRLSGTTIQ
DQSPSPLVTRTPSQLECSQSNGALCFINPLFLKVHNPEGGNHTPPSSTSHYNNPHHLNNN
STTTTTATTVQVQQHCTSNPEQLINCTNSSQPPSNSPQSPSPGNIPQHHNNSVSQAKSVS
RPPPPRPPPPHCAPRRPAPPRRQCSMPEKISWINPPKEKDRVGEKEKGGEREKGSSLLSR
LGSSLSISPSSSFLLSSPPKKLSISAPISIPLSLSSSPSRPKPTPPSDVDCHLALDDQTI
ENAISLSLAKLSLRNATTPDDNTEGNSPSTQDPAPSRREEGRGGRGDSVQRLSDMSLSTE
SSADSLDFSQGFFPPLPEPSPPTTNNLVLPPLTHPYSSMEEDDDDEDEADFGGSMESDQD
QDLTITPPGLRTKRRASAGAMVIQRALRGHLRKMSGVFNSLMTPEKRAIRRVLELSRDKG
SYFGCLVQDYLSFLQEGGGSQAWQCHASGLELLQTLRQFITQMKSYLRQSSELEPPIESL
IPEDQIDYVLEKAMHKIVLKPLKGVVGVALQEFQVRSGAWQELKENLSLAKVRQPQEMGV
TDALPPDPVAIEKIRHKFHTMCKLYSPEKKVTMLLRVCKLIYTIMEDNSGRLYGADDFLP
MLTYVLAQCDMPQLDNEILYMMELLDPSLLNGEGGYYLTSAYGAMSLIRNFQEEQAARVL
SSETRNTLHQWHRRRTTQRTAPSVDDFQNYLRVALQELDSGCTAKTLQVQPYATTEEVCQ
ICAYKFKIPDPENYALFLLTEGSSQQLAPDTYPQKIKAELHSRPQAAPFHFVFRRVANLN
ELDVTSLEPQSILNDVNLTTDSEPNRNDVALTPSDPQPNFNLGPSLSLSLPPNQQNGNSI
SI
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaagtacactcatcccacccagcctgagggagaagaaagggagcttcttcaag
ctgatcgactcatttgcctgggagatcgggactctgaagagggaggtggtgcagaaggct
gagccagcagagagggacccagagcctgtcatactacaggggctggatggggaagtggga
ggtctgttcctacaggctcctccctgtgttggtgtgggggcacggctggctggagctaga
gattcaggctacgactcgttgcgtagaaggatgagtgtgctggacaggctggtgcagacg
cacgttgtgtggctgcagctgggacttaaccatgcagactccacaagcatactggaaccg
cagcccaccgggacgtttctggtgaggaagtcgactaccctgcagaggaaggtgatctct
ctgcgtatgcatcaggactctgagacacccgtcaaagacttccctgtgaaggagagtcaa
tacacattctccttggagggatcgggcctcgggttcgcagacctgttccgtcttgtggcc
ttctgctgcatcagcagggatgtcttgccattcaccctaaagcttcctgaagccatctct
gcagccaggacaccaacagacttggaggaggtggccaagctaggagtaggcttctgggac
tctgagcattgctgcaggagcaggagttctgtctcccggttgtccgggacaaccatccag
gaccaatcacccagccccctggtcacccgcaccccgtcccagcttgagtgttcccagtcc
aacggggctctctgcttcatcaaccccctcttcctgaaggttcacaacccagaggggggc
aaccacacccctccctcctccaccagccactacaacaacccccaccacctaaacaacaat
agtactacaacaactacagcaacaacggtacaagttcaacagcactgtaccagcaaccca
gagcaacttatcaactgcacaaacagctctcaaccccctagcaacagccctcagagtcct
agccctggtaacatcccccagcatcataacaacagtgtgagccaggctaagagcgtgtcc
cgcccaccaccgcctcgccccccacctccccactgtgccccacgtcgccctgcccctcct
cgacgccagtgcagcatgcctgagaagatatcctggatcaacccccccaaagagaaggac
agggtgggagagaaggagaaaggaggagaaagagagaagggcagtagccttctctcccgc
ctgggctcctctctcagcatcagtccatcctcttctttcctcttatcctcccctcctaag
aagctcagcatcagtgcccccatctctatccccttgtccctctcctcctctccaagtagg
ccgaaacccacgccgccaagcgacgtcgactgccatcttgctctcgatgaccagactatt
gagaacgccatttctctcagtctggctaagctgtcactgagaaacgccaccacccctgac
gacaacacagagggaaacagtccgtccactcaagacccagccccctcccgtcgagaggaa
ggaagaggaggaagaggggacagtgtgcagcgcctgagcgacatgagcctttccaccgaa
tcctctgccgactcactagatttttcccagggcttcttccccccactccctgaacccagc
ccccccaccaccaacaacctggtcctgccccccctcacccacccctatagcagcatggag
gaagatgacgatgatgaagacgaagcagacttcggcgggagcatggagagcgaccaagac
caggacctgaccatcacccctcccgggctgcgcaccaaacggcgagccagcgccggggcc
atggtcatccagcgggccctcaggggccacctccgtaagatgagtggggtgttcaactcg
ctgatgaccccagagaaacgggccatacggagagtcctggagctgtcgagggataagggc
tcttacttcggctgcctggtgcaggactacttgagcttcctgcaggagggaggcggcagc
caggcctggcagtgccacgcatcaggactggagttgctgcagacgctacgccagttcatc
acccagatgaagagctacctgcggcagagctctgagctggagccccccatcgagtcactc
atcccagaggaccagatcgactatgtcctagagaaggccatgcataagattgtcctgaag
ccccttaaaggtgtggtgggagtggccctccaggagttccaggtccgcagcggggcgtgg
caggagcttaaggagaacctctcattggccaaggtccggcagccccaggaaatgggcgtg
actgacgccctccctccagatccagtcgccatagagaagatccggcacaagtttcacacc
atgtgtaaactctactcccctgagaagaaagtgaccatgctgctgcgcgtgtgtaaactc
atctataccatcatggaggacaactcaggtcgtctgtacggggcagatgacttcctgccc
atgctgacttatgtgttggcccagtgtgacatgcctcaactagataacgagatcctctac
atgatggagctgctggacccctctctgctcaatggagaaggtggatactacctgaccagt
gcgtacggagccatgtccctcattaggaacttccaagaggagcaagcagctcgtgtactc
agttctgaaacacgcaacacactccaccagtggcaccgtcgccgcaccacccagcgcact
gcaccctctgtagacgactttcagaactacctgcgagtggcgctccaggagctggacagc
ggctgcacggccaaaaccctgcaggtgcagccctacgccaccacagaggaagtctgccag
atctgtgcctacaaattcaaaattcccgaccctgagaattacgctctgttcctgctcact
gagggctcgagccagcagctagcccctgacacatacccccagaagatcaaagctgagctc
cacagtcgaccccaggctgcaccttttcacttcgtcttccgtcgcgtggctaacctcaat
gaactggacgtgacctctcttgaaccccagtccattctcaatgacgtcaaccttaccacg
gactctgagcccaatcgcaatgatgtagccttaaccccttcggacccccagcccaacttc
aacctgggtcccagtctcagcctcagtctaccccccaaccagcaaaatggcaactccata
tctatctga
DBGET
integrated database retrieval system
