KEGG   Salvelinus namaycush (lake trout): 120017705
Entry
120017705         CDS       T07522                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03010  Ribosome
snh04120  Ubiquitin mediated proteolysis
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120017705
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120017705
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120017705
   04137 Mitophagy - animal
    120017705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:snh03011]
    120017705
   04121 Ubiquitin system [BR:snh04121]
    120017705
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120017705
Ribosome [BR:snh03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    120017705
  Archaea
    120017705
Ubiquitin system [BR:snh04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120017705
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120017705
  Exosomal proteins of colorectal cancer cells
   120017705
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 120017705
NCBI-ProteinID: XP_038816568
UniProt: A0A8U0P0U7
LinkDB
Position
Sna22:complement(26944240..26946906)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gataccattgaaaatgtcaaggctaagattcaagacaaagaaggtatccctcctgatcag
cagaggttgatctttgctggtaagcagctggaggatggacgcacactgtctgactacaac
attcagaaggagtccactctgcacttggtgctgagactgcgtgggggtgccaagaaaagg
aagaagaagtcctacaccactcccaagaagaacaagcacaagaggaagaaggtcaaactc
gcagttctcaagtactacaaggttgacgaaaacggcaagatccaccgtctacgtcgtgag
tgcccagctgatgagtgtggcgctggcgtgttcatggccagccactttgataggcactac
tgtggaaagtgctgcctcacctactgcttcaacaagcctgaggacaagtaa

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