Salvelinus namaycush (lake trout): 120017742
Help
Entry
120017742 CDS
T07522
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120017742
03041 Spliceosome [BR:
snh03041
]
120017742
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120017742
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120017742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
120017742
NCBI-ProteinID:
XP_038816630
UniProt:
A0A8U0P1K7
LinkDB
All DBs
Position
Sna2:72058000..72076119
Genome browser
AA seq
679 aa
AA seq
DB search
MSDYGSPGAGAGAGGKKDAFADAVQRARQIAAKIGGDAGPPSNNGGGGEGFPFQTLKRSL
EDGDQPDAKKMSSQGDRDSATALSIGAQLAALSQQSVRPSTMTEEYRVPDGMVGLIIGRG
GEQINKIQQDSGCKVQIAPGEQLDSGGMPERSVSLTGNPDAIAKAKMFLDEIVSRGRGAP
SSAFHESTNGQSGSMQEMMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNMD
KPLRIIGDPYKVQQAKELVNEILRERDHAGFGDRNNFGNQMGGGGGGGGGGGGGMDVPVP
RHSVGVVIGRSGEMIKKIQADAGVRIQFKPDEDEDDGAGPDKIAHIMGPPDRCEHAASII
NELLQSIRVREDGGQGGPPGPPGTGGMPQGGHGRGRGQGNWGGPPGGEVTFSIPAHKCGL
VIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEDKIEAP
LCPLGGGPGGPGPAGPMGPYNPNPYNPGPGGPGGPPHGGPPGGHGYGAPQGWGNTFQQWQ
APGGPHDPNKAAADPNAAWAAYYAQYYQQQPGGAMPGQAPNAPAAAPVQADPSQAAQTPG
GQPDYTKAWEEYYKKMGMAQPGGGAAAAAPAAAVAGGGAGGQQDYSAAWAEYYRQQAAFY
GPGGAPGQAATPQQGQQAQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggctcacccggggccggagcgggcgctggaggcaaaaaagatgctttc
gcggacgccgtgcagcgagccagacagattgcagctaagatcggaggagatgctggacct
ccaagtaacaatggaggaggaggagagggcttcccgttccaaacactgaaacgttctctg
gaggatggagaccaaccagatgccaagaagatgtcttcccaaggggacagagactcagcc
actgctttgtctatcggagctcagctcgctgccctgtctcagcaaagtgtcagaccctcc
actatgacagaggagtacagagtgccagacggcatggtcggactcatcattggtcgaggg
ggcgagcagatcaacaagatccagcaggactcgggctgcaaggtccagatcgctccaggt
gagcaactagacagtggtggcatgccagagaggagcgtctccctcacaggaaaccctgac
gccatcgcgaaagccaagatgtttctggatgagattgtatctcgggggcggggtgctcct
tcctctgctttccacgagtcgaccaatgggcagagtggctccatgcaggagatgatgatc
ccagctggcaaggccggcctaatcatcggcaagggaggagagaccatcaaacaactacag
gagcgtgctggagtaaagatgatcctcatccaagatggttcccagccgcccaacatggac
aaacccctgcgcatcatcggagacccctacaaagtacagcaagccaaggagctggtgaat
gagattctgagagagagggatcacgctggctttggagacagaaacaattttggcaaccaa
atggggggaggaggaggaggaggtggtggcggaggaggaggcatggatgtgccggtgccc
cgccactctgtgggagttgtgattggtcgaagtggagagatgatcaagaagatccaggca
gacgctggagttaggatacagttcaaaccagatgaagatgaagatgacggtgcaggtcct
gataagatagcccacatcatgggccctccggaccgctgtgagcacgctgcctccatcatc
aacgagctgctgcagagcatcagagtcagggaggacggaggacaggggggtcctccaggt
ccacctggcacgggggggatgcctcagggtggccatggcagggggcgaggccagggcaac
tggggcggtcctccgggaggtgaggttaccttctctatccccgcccacaaatgcggcctg
gtgattggtcggggtggcgagaacgtcaaggccatcaaccagcagacgggggctttcgtg
gagatctcgcgtcagccgccgcccaacggtgaccccaacttcaaactgttcatcatcagg
gggtcccctcaacagatagatcatgccaagcagctcatagaggacaagatcgaggctcct
ctgtgtcctctagggggtggtcctggtggacctggtcctgctggtccaatgggcccctac
aaccccaacccttacaacccagggcctggtggccccggaggacccccgcatggcggcccc
ccaggtggtcatggttacggggcccctcagggctggggcaacaccttccagcagtggcag
gcccctggagggccacacgaccccaataaggcagcggcagaccccaatgcagcgtgggca
gcctactatgcgcagtactaccagcagcagccagggggcgccatgccgggacaggccccc
aacgccccagcagccgccccagtccaggcagacccctcccaggcagcccagacccctgga
ggccagccagactacaccaaggcctgggaggagtattacaagaagatgggcatggcccag
cccggtggaggtgctgctgcagcggcgccggctgcagctgtagccgggggaggagccgga
ggacagcaggactacagtgcagcctgggctgagtactacaggcagcaggcggccttctac
ggccctggaggggctccgggacaggctgccacccctcagcaaggacaacaggcccagtga
DBGET
integrated database retrieval system
