Salvelinus namaycush (lake trout): 120017854
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Entry
120017854 CDS
T07522
Symbol
nphp1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120017854 (nphp1)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120017854 (nphp1)
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GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
BSP_II
hSH3
SH3_3
NMD_SH3
FAM176
SH3_10
Motif
Other DBs
NCBI-GeneID:
120017854
NCBI-ProteinID:
XP_038816743
UniProt:
A0A8U0P2F5
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All DBs
Position
22:33637172..33667130
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AA seq
663 aa
AA seq
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MPPKRQGPLQTVQRETDDIKRQVDSLIKDARLSGGSGRTEAYQSRCIHLQNLVEETTRKL
KKLTKADEPAPVGNYDQRKMEEECRLRGIEEKLLVLVQELSPPQKREGGPHRSSQAQEDE
EEEDSSEEDSEEEESVEDEEEVDEEDVVTKTMEQIPESGTATYMVISAFKGEQEGDLTIQ
MGEVLTILSKNEDGWWLAQDSKGSKGLVPKTYLKRYSDQDEDDDEEASEDEELESKRKQS
SNWDSVRRAITEIDATDVLSAMGAIPAGFRSSTLSKLLNEGITYRASHYIQPELSQSKLS
FKDLFRDPDTGKVRQRTARTSLTLTLWSCKSIPTPGVGVQVLSRHIRLCAFDGTQVLSNI
HTIRATCQANNVKTWSFSPRMTGNLPSLLDGDCFLRCNSDAPELGILFELGVTYIRNSTG
ERGDLSCGWAFLKLFDTNGAPVPHRTYELLVHGGTPYEKDIEVDPSLTRGATGTGMFQQM
MLSRKLPKLFLKLKSPNVRTRSQLSALPDTLVGSLSSIHLLVLHRQLLADILLMDRATMQ
NADLICSPLLATFPEIMDQSDLLDALRKSWLEAESNMKRSEKRDLPLLKRKFVRVYMDNM
YPLLYSADLPPPRWADEMVENQRARVIFNSSLEPFHTHTPDSPPRHQAFDISQLTYDLLC
MAQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaagacaagggcctctgcaaacagtgcaaagagagacggatgatatcaaa
agacaggttgacagtctgataaaagatgcacggctgtcgggtgggtcagggcgcacagag
gcatatcagagtcgatgcatacatctacaaaacttagtggaggagacaaccaggaagctc
aagaagttaaccaaggctgatgagccagccccagtggggaattacgaccagaggaagatg
gaggaggaatgccgtttgcgggggattgaggagaagctgctggtcctagtccaggagctc
tctccgcctcagaaacgtgagggagggcctcataggtcatcccaagcccaggaagatgaa
gaggaggaagacagtagtgaggaagacagtgaggaagaggagagtgtagaagatgaggaa
gaagttgatgaggaagatgtagtcacaaagaccatggaacaaatcccagagtcaggcact
gccacgtatatggtcatcagtgcctttaaaggagagcaggaaggagatcttaccattcag
atgggtgaggtcctgacgattctcagtaaaaatgaggatggctggtggcttgctcaggac
tcaaagggcagtaagggactagtccccaaaacctacttgaagagatattcagaccaggat
gaggatgatgatgaggaagcgtcagaggatgaggagcttgagtccaaaaggaagcagagc
tcaaactgggacagtgtgaggagagccatcactgagattgatgctactgatgttctgtca
gccatgggtgctatccctgctgggttcaggtcatccaccctctctaaactactaaatgaa
gggattacctacagagcaagtcactacatccagccagagttgagccaatccaaactgtcc
ttcaaagacctcttccgggacccagacactggaaaagttcgtcagaggacagcgaggacg
tccctcactctgactctgtggagctgcaagagtatccccaccccaggggtcggagttcaa
gtcctcagtcggcacatccgcctctgcgctttcgacggtactcaggttcttagtaacatc
cacaccatccgagccacttgccaagcaaacaacgtcaagacctggtccttttctccccgg
atgactgggaatctacccagccttttggacggggactgttttctgaggtgcaactcggac
gctcctgagctgggaatattatttgaacttggcgtcacatacatccgaaattctacaggt
gagagaggagacctgagctgtggctgggccttcctgaagctctttgacaccaacggagca
cctgtcccacacaggacctatgaattgcttgtgcatggaggcacaccgtatgaaaaggac
atagaggtggatccgtcattaacaagaggagccacaggaacaggcatgttccagcagatg
atgttgtccaggaaactccctaaactcttcctcaagctgaaatcgccaaacgttcgcaca
aggtcacagctgagtgctcttccagatactctagtgggcagtctctccagtatacacctg
ctggttctacacagacaactactggcagatattctgcttatggacagggctaccatgcag
aatgcagatctgatctgtagtcctctgctggccaccttcccagagatcatggaccaatcg
gacctgctggatgccctgaggaagtcttggttggaggctgagagcaatatgaagagatct
gaaaagagggacctaccgctgctgaagagaaagtttgtgagggtatacatggacaacatg
tatcctctcctctactcagctgacctgccccctcctcgctgggctgatgagatggtggag
aaccagcgggcacgagtcatcttcaacagttccctggaaccattccacacacacaccccc
gacagcccccctcgccaccaagcctttgacatctcacagctcacctatgacctcctctgc
atggcccaatag
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