Salvelinus namaycush (lake trout): 120017930
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Entry
120017930 CDS
T07522
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120017930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017930
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120017930
Small GTPases and associated proteins
Rab associated proteins
120017930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120017930
NCBI-ProteinID:
XP_038816814
UniProt:
A0A8U0P3S8
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All DBs
Position
Sna22:20131561..20159717
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AA seq
1026 aa
AA seq
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MLRNDSLSSDQSESLRPPPPRPYKSKRGGAGKRQTSVSSSEEEGGTTPEYSSCEDAEIES
VSERGDWECYPPDPTVWHCCSQHPVTWQPSKEGDHLIGRITLSKRSAMPKEAGAPLGLKV
VGGRVTEAGRLGAFITVVKKGSLADIVGHLRAGDEVLQWNGKMLPGATQKEVYNIILNSQ
AEPQVELVVSRPIGDIPRIPDTSHPPLESSSSSFESQKMERPSISVMSPTSPSTLRDHPQ
LMPGQLAVKLWYDKVGHQLIVNVVQATELPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKT
VKKSGEPKWNQTFVYSHIHRRDFRQHMLELTVWDQPRLPDENSMFMGEILIELETAPLDD
KPHWYKLQTHDVSSIPLPWPSPYMPRRITDTPSKKLQRSQRVKEPDLGQYIVCMFAFMNT
ASVCVAAERGSRERGRQQKDPHATTLEVPEQKRTPQHRSRSVSPHREEQGRGRSRPANVP
TQRSLDDEIHHSRRSRSPTRYYDSTRGHYQEQDYVDDRCVEVILIHQSMRGKSAECLHTE
SDLHTSLDRVKTRSASTNCLNPERNHSVPSPDPQRGHLQGGASLSTSVMSSSAARRVRQL
PQVPDKSSSPVEQALAAEERVRQLQMKVQQRDSYRSSAAPSTSSRDVERVLKSKRELYKD
QRRTSCENVSRKSSDSDVSDVSAISRTSSASRISSTSYISIQSERPRGRFNKAMRASSRS
MLKSTSVSGEIYGIEHTDGSQSDTALGGGKKRRSSLSQRVVAIVGLPSRRSCSTSQLTSQ
KAVVVDTKKKGKKKNKIQIQRSTEVGMAVEYPRSAMNRQASRDSTDGSMNSYSSEGNLIF
SGMRLGVDSQFSDFLDGLGPAQLVGRQTLATPAMGDVQIGMMDKKGQLEVEVIRARGLTP
KPGSKSLPAPYVKAYLLDNGACKAKKKTKIARKTLEPLYQQALLFEESPQGKVLQIIVWG
DYGRLDHKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLASLTRRASQTSLDSSG
PAGMRS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaatgattcgctcagctcggaccagtcagagtctctgcggccgcccccgcca
cggccctacaagtcaaaacgtggcggtgccgggaagagacagacatctgtcagcagctca
gaggaagagggagggaccacgccggagtatagcagctgtgaggacgccgagattgagagt
gtcagcgagagaggggactgggagtgctacccgccggaccccactgtgtggcattgttgt
tcacagcatccggtgacatggcagccgtccaaagagggtgaccatctaattggccgaatc
accctgagcaagaggagtgctatgcccaaagaggccggagcaccgctggggctgaaggtg
gttgggggaagggtcacagaggcgggcagactgggagccttcatcactgtagtcaagaag
ggcagtctggccgacatcgtgggacaccttcgagcaggggatgaggttctgcagtggaat
ggcaagatgttgccaggagcaacccagaaagaagtttataatatcattctcaattcccaa
gcagaacctcaagtggaactagtggtgtctcggcccattggtgatatcccaagaatccca
gacacgtcccaccctccattagaatctagttccagttcatttgagtcccagaagatggag
cggccatctatatcggtcatgtcccccaccagccccagtacacttagagaccacccacag
ctaatgcctggacagcttgcagtcaagctgtggtatgataaggtgggacaccagctgatt
gtgaacgtggtacaggctacagagctgcctccccgcccggacgggcgacccagaaacccc
tacgtcaaaatgtacttcctgccagaccgaagcgataagagcaagcggaggactaagaca
gtgaagaagagtggagagccaaagtggaaccagacgtttgtgtactcccacatccaccgc
agagactttcgccaacacatgctagagctgaccgtgtgggaccagcctcgcttacctgac
gagaatagcatgttcatgggagagatcctaatagagctggagacagccccgttggatgac
aagcctcactggtacaagctgcagacccatgacgtgtcgtctatccccctgccctggcca
tccccttacatgccccgcagaatcacagacacacccagcaagaagctgcagcgttctcag
cgtgttaaagagcctgatttgggacaatatatcgtatgtatgtttgcttttatgaacaca
gcttctgtgtgtgtagctgccgagaggggttcgcgggagagggggaggcagcagaaggat
ccccacgccaccactctggaggtgccggagcagaagaggacaccccagcatcgctctcga
tctgtctctcctcacagagaggaacagggcagggggcgatcacgacccgccaatgtcccc
acccagaggagtttggatgatgagatccaccatagtaggaggtctcgttctcccacccgc
tactacgactctaccagaggacactaccaggagcaggactatgtagatgacaggtgtgtt
gaggtcatcctgatccaccagtcaatgcggggcaaaagtgcagaatgcctacacactgaa
agtgatctacatacctctctggacagggttaagactaggagtgctagcaccaactgtctg
aacccagaaaggaaccatagtgttccttcaccagatccccaaaggggccacctccaaggt
ggtgcgtctctgtccacctcagtgatgtcctcgtcagcagctcgcagggtcagacaactc
ccacaagtcccagacaagagcagcagccccgtagagcaagccctagcagcagaggagcgt
gttcgtcagctccagatgaaggtgcagcagagggactcctacaggagttctgctgctccg
tccacttctagcagggacgtggagagggtgctcaagagcaaacgcgagctgtataaggac
cagaggagaaccagctgtgagaacgtatcccgcaagtcttcagacagtgatgtcagcgac
gtgtcagccatctctcgcaccagcagtgcctcccgcatcagtagtaccagctacatatcc
atccagtcagagagaccccggggacgcttcaacaaggcgatgcgtgcgtcaagccgcagc
atgttgaagagcaccagtgtgagtggtgagatctatggcattgagcatacggacggcagc
caatcagatacagcattgggcgggggcaagaagcggcgctccagcctcagccaacgggtg
gtggccattgtgggcctgccctccagacgcagctgcagcacctcacagctcacctcccag
aaagcagtggtggtggatactaaaaagaagggcaagaaaaagaacaaaattcagatccag
cggagtacagaggtgggcatggctgtagagtacccccgctctgccatgaaccgccaggcc
agcagagactccactgacggaagcatgaacagctacagctctgaggggaatctaatcttc
tcggggatgaggctgggggttgacagtcagttcagtgacttcctggatggccttggcccc
gcccaactggtgggccggcaaacattagccacacccgccatgggagatgttcagatcgga
atgatggacaaaaaaggccagctagaggtggaggtgattagagcacgtggccttaccccc
aaaccagggtccaaatcactcccagcaccctatgtcaaggcctacctgctggataacgga
gcctgtaaagccaaaaagaaaaccaagattgcacgtaaaaccctggagccactctaccag
caggccctgctgtttgaggagagcccacaggggaaagtcctccagataatagtctggggc
gactacgggcgactggatcacaaatgcttcatgggagttgcacagatcctattggaggag
ctggacctctccagcacagtgattggctggtacaaattgtttcctccttcctcattggtg
gaccctaccttagcctcgcttacgcggcgggcgtcccagacatccctggacagctcagga
ccagctggtatgcgctcttag
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