Salvelinus namaycush (lake trout): 120017938
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Entry
120017938 CDS
T07522
Name
(RefSeq) YLP motif-containing protein 1-like isoform X1
KO
K04496
C-terminal binding protein [EC:
1.1.1.428
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04310
Wnt signaling pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120017938
04330 Notch signaling pathway
120017938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017938
Enzymes [BR:
snh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.428 4-methylthio 2-oxobutanoate reductase (NADH)
120017938
Membrane trafficking [BR:
snh04131
]
Endocytosis
Macropinocytosis
Others
120017938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
120017938
NCBI-ProteinID:
XP_038816822
UniProt:
A0A8U0P213
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All DBs
Position
Sna22:22514235..22563714
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AA seq
1039 aa
AA seq
DB search
MLVTSKQLNIGRSHSWDTLGGNEGQWAGGESVYDHQGRIAGRRNSLSYRGDRGGYYEPPP
GVRPPDLDLKRDPYSYQDSLYSQQGYAADPREMRKGSVPELNHYDRPTMAHSHQGSVVSQ
EYYPHDPAMAPRPPEDPRGFYRVEQQPQQPQPHPLNRSPSHYGMNPVGRLPWDQRQGGRP
GPPGPSSASPLPPPPPPPTAHGMNQVYSQPAAVAAAAKMMPDGQRSPAHYGMEQPSSPRY
ASEPPPLAGQPVYTDINGRPLDNRQQQPAATCLVVDPNTQGLDGSMQQRGMMMRQDCTSP
YGVQQQPPQTNMQIYNPNPPLAAPALAPLPPPPAPVALPPPPPTAPQTPADPKRNADPEF
LALLRNEGLSESTISSLIQQGFDTTGMLAVMEENDVRSVAPNLGQARVLSRVAISVKRPL
EHTPTTQQQAPMRGRSNSFSHRSDMYLQQQQQQQHQHHQQAMAMGMDPRLMPPQTPGVMQ
TISPAMAEAMARRPNSAPSQHLLETTQGYPGPRTPGPYSGAMVPVQSRPVSAYSQHPGAA
MQAMQQQQMPVSMPALPPPQQAPKAYSTNYTVPMELMKRDRSLQPMSPMHSPHLSPQMMR
KAGGTPSDGAMMPVGTTMQSQSAMAANQKLSRRTGPPVIVSTMASPDTSIRPQIMNGPMH
PRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAMMYHTITLTRED
LEKFKALRIIIRIGSGYDNIDIKAAGEMGIAVCNIPSAAVEETADSTLCHILNLYRRNTW
LYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRSGQAVAVRAKVFGFNVIFYDP
YLQDGLERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNSA
RGGLVDEKALAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHTAWYSEQASL
EMREAAATEIRRAVTGRIPDSLRNCVNKEFFVTTAPWTVEQQQMQQQMHPELNGAAYSRV
NQTMVQAIATGGMQDKLYT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcaccagcaagcagttgaatatcggtcgctcccacagttgggacaccctgggg
gggaatgaggggcagtgggccgggggagaaagcgtttacgaccaccaaggcaggattgcg
ggccgacggaactcgctgtcttacaggggagacagaggaggttactacgagccaccccct
ggggtgcgccctcctgacctggatctgaaacgagacccctactcctaccaggactctctg
tacagccagcagggctacgctgctgatccccgggaaatgagaaagggctcagtccctgag
ctaaaccactacgaccgtccaaccatggctcatagtcatcaaggatccgtcgtctcacag
gaatattatccccatgaccctgctatggctccccgaccaccggaggatccccggggcttc
taccgggtggagcagcagccacagcagccacagcctcacccgcttaacagatccccgtcc
cactatgggatgaacccagtgggacggctgccatgggaccagagacagggagggaggccc
ggacctccgggtccttcatcggcttctcctcttcctcctccccctcctccgccaactgcc
catggcatgaaccaggtttacagtcagcctgcagctgtagctgccgctgccaagatgatg
ccagatggccagcgctctcctgctcactatgggatggaacaaccatcttcgcctcggtac
gcatctgagccaccccctctagctggacagccggtctacaccgacatcaacggccgtccc
ctggacaatcggcagcagcagcccgcagccacctgcctggtggtggaccctaacactcag
ggactggacgggagcatgcaacagcgaggtatgatgatgaggcaggattgcacctcgccc
tacggagtacaacaacagcctccacagaccaacatgcagatctacaaccccaaccctcct
ctcgccgcccctgctcttgcccctcttcctcccccaccagcccctgtagccctcccccct
ccacctcccacagccccccagacgcctgcagacccaaagaggaacgccgacccagagttc
ctggctctgcttcgcaatgagggtctctcagagagtaccatctcctcactcatccagcag
ggctttgacacaaccggtatgctggcagtcatggaagagaatgacgtgcgctctgtggct
cccaatttagggcaggcgcgggtgctttcgcgggtagccatcagtgtcaagaggcccttg
gagcatacacctacgacccagcaacaggcccccatgcggggccgctccaacagtttcagc
caccgctctgacatgtacctccaacagcagcagcaacagcagcaccaacatcatcagcag
gccatggcaatgggcatggatccacggctgatgccaccacagacccctggtgtcatgcag
accatctcccccgcaatggccgaggccatggccaggaggcccaacagcgctccctctcag
cacctcctagaaaccacccagggctacccaggacctcgtaccccggggccctacagtggc
gccatggtccctgtccagtcccggcccgtgtctgcatactcccaacacccgggggctgca
atgcaagccatgcaacaacagcagatgccagtgtccatgcctgccctgccgccacctcag
caggccccgaaggcatactccaccaactacacagtgcccatggagttgatgaagcgggac
cgcagcctgcaacccatgtcgcccatgcacagcccccacctcagccctcagatgatgcgc
aaggctgggggcaccccgtctgatggcgccatgatgcccgtgggtaccaccatgcagagc
cagagtgctatggccgccaaccagaagcttagccgccgtaccggcccacctgtcatcgtc
tccaccatggcatcaccagatacaagtatccggccccagatcatgaatgggccgatgcac
cctcgccccctagtggccctgttagatgggcgtgactgtacagtagagatgcccatcctc
aaagacctggccactgttgccttctgtgacgcccagtccacacaggagatccatgagaag
gtgctgaacgaggcagtaggggccatgatgtaccacaccatcaccttgaccagagaagac
ctggagaaattcaaggctctacgcatcatcatccgcatcggcagcggctacgacaacatc
gacatcaaggcggccggagagatgggcatcgcggtgtgtaacatcccgtcggcggcggtg
gaggagacagcagactccactctgtgccacattctcaacctgtaccggcggaacacctgg
ctgtaccaggctctccgggagggcacgcgggtccagagcgtggagcagatcagagaggtg
gcgtccggagccgccaggatccgaggagaaacgctgggcctcatcggcttcggtcgttca
gggcaggcggtggcggtgcgggccaaggtgtttggcttcaacgtgatcttctacgacccg
tacctgcaggacggccttgagcgttcgctgggtgttcagcgtgtctacaccctgcaagac
ctgctctaccagagtgactgtgtctccctgcactgcaacctgaacgaacacaaccaccac
ctcatcaacgacttcaccatcaaacagatgcgtcagggtgcgttcctggtgaactctgcg
cggggaggtctggtggatgagaaggccttggctcaggccctgaaagagggcaggatacga
ggggccgcactggacgttcatgagtcagaacccttcagttttacccagggtcctctgaag
gatgcccctaacctgatctgtactcctcacacggcctggtacagtgaacaggcctcacta
gagatgagagaggcagccgccacagagatacgcagagccgtcactggccgtatccccgac
agtttacgaaactgtgtcaacaaggagttctttgttaccacggcaccctggacagtggag
cagcagcagatgcagcagcagatgcaccctgaactcaacggtgctgcgtacagccgagtc
aaccaaaccatggtacaggccatagcaactgggggaatgcaagacaaattatatacctaa
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