Salvelinus namaycush (lake trout): 120017979
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Entry
120017979 CDS
T07522
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120017979
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120017979
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Paralog
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
120017979
NCBI-ProteinID:
XP_038816869
UniProt:
A0A8U0TIQ9
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Position
Sna22:complement(33255445..33257908)
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AA seq
293 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFTERPVLLASSTPTRSPEDLSMFALPTLNFSPEQVASVCETL
EETGDIERLGRFLWSLPVAPGACEQINKHESILRARAVVAFHTGNFRDLYHILENHKFTK
DSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRG
LLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQGIRQNG
MRSLSESGCTPRSSAESPSTAASPTTSISSMTERVDTGTSILSVTSSDSECDV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcact
gagcgccctgtgctcttggcgagcagcactcccaccaggtctccagaagacttgtcaatg
tttgcgctaccgaccctcaacttctctccggagcaagtggcgagcgtctgtgagacgctg
gaggaaaccggagacattgaacggctgggacgattcctatggtccctgccggtggcacct
ggagcatgcgagcagatcaacaagcatgagtccatcctgcgagctcgcgcagtggttgct
ttccacacggggaattttcgagacctttatcacatcttggagaaccacaagtttaccaaa
gactcccatggcaaactgcaggccatgtggctggaggcacactaccaggaggccgagaag
ctgcgcggtcgccccttaggaccggttgacaagtacagggtacggaagaagttccccctg
cccaggaccatctgggacggcgagcagaagacacactgtttcaaagagaggacgcgcggt
ctgttaagggagtggtaccttcaggacccatatccaaaccccagcaagaaaagggaactg
gcacaagccactggactcactcctacacaggtcggaaattggtttaaaaaccggaggcaa
agagacagagccgcggcagcaaaaaacaggcttcagcaccagggaattagacagaacggt
atgcggtccctttcagaatccgggtgcactccacgcagctcggccgaatcgccgtctacc
gcggccagtcctactaccagcatctccagtatgacagagcgagttgacactggaacgtcc
attctttcagtaacatccagtgactccgagtgcgacgtatga
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