Salvelinus namaycush (lake trout): 120018027
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Entry
120018027 CDS
T07522
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120018027
G protein-coupled receptors [BR:
snh04030
]
Others
Chemoreception
Vomeronasal pheromone
120018027
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GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120018027
NCBI-ProteinID:
XP_038816910
UniProt:
A0A8U0P2F2
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Position
Sna23:3806604..3810179
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AA seq
843 aa
AA seq
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MRGMAVPAPICSLLGQPALPLLSAEGDINIGAVFGLHRNALFKVHSFTSRPEKTPCISFN
PREFQFAQTLIFALEEINNSSDLLPGLSLGYQVYDSCSSATLGIHSALALMNSPGPEDSL
GDPSACSRSPAVLGIVGESSSTSTIGISSLVGPFSIPVISHFATCACLSNRKKFPSFFRT
IPSDFYQSRALAKLVKHFGWNWVGVVNSNNDYGNNGMATFMEAAWHEGVCVEYQESIHRT
DSREKLLEVVKVIRRATARVVVLFLTLGDLIPLLNELALEGDPGLQWVGSESWITARLLA
DNKAYDFLRGAVGFAIRNARLDGLEGFLDKVHPSQTPENTLLREFWESVFQCSFEGGSST
LCTGTESLAKLKNQYTDVSELRISSKVYTAVYAIAHALHNLLTDLKNHTDSGNIPVYTSQ
QVLQYLKEVRFRVKTGEEIWFDANGDVVACYDLVNWQQDENGTLQFHAVGLYDSSMPPEQ
RITFNKRKLVWAGGQAEAPAGVCSESCPTGTRKAVQKGKPVCCYDCVPCAEGEISNITDS
NGCYRCDLDYWSNEKRDRCVLKPVEFLSYEEMMGIVLVFFSLLGSGVTTLVAVVFSVHKD
TPIVRANNSELSFLLLFSLTLCFLCSLTFIGRPSEWSCTLRHTAFGITFVLCISCVLGKT
IVVLMAFSATLPASNIMKWFGPPQQRLSVLAFTLIQVLICALWLTVSPPFPYKNMKTYKE
KVILECDVGSAIGFWAVLGYIGLLALLCFVLAFLARKLPDNFNEAKFITFSMLIFCAVWI
TFIPAYVSSPGKFTVAVEIFAILASSFGLLFCIFAPKCFIILLRPEQNTKKHMMGKTSND
IRY
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtatggctgttccagccccaatctgctctctgctgggccaacccgctctgcct
ctcctgtctgccgagggggacatcaacattggggcagtgttcggtctacataggaatgcc
ctcttcaaggtccattcgttcacctccagaccagagaaaacaccctgtatcagtttcaac
ccacgtgagttccagtttgcacagaccctgatctttgccctggaggagatcaacaacagc
agtgatcttctcccaggtctgtctctgggttaccaggtctatgactcctgcagctctgcc
accctgggcatccactcagccctggccctgatgaacagccctggacctgaggacagcctg
ggagacccctccgcctgctccagatctccagccgtgttgggcattgtaggggagtcaagc
tccacatccaccatcggaatatcatccctggtcggaccattcagcatccctgtgatcagc
cactttgccacctgtgcttgtctgagtaacagaaaaaagttcccctccttcttcagaacc
atccccagtgacttctaccagagcagagccctggcaaagctggtcaaacactttggatgg
aactgggtgggagtggtgaacagcaacaatgactatggaaacaacggcatggccacattc
atggaggcagcgtggcatgaaggggtctgtgtagagtaccaagagtccatacaccgcaca
gactcccgagagaagctcctggaggtcgtcaaggtgatcaggagggccacagccagggtg
gtggtactgttcttgaccttgggggacctcatacccctgctgaatgagttggctctggag
ggagacccagggctgcagtgggtgggcagcgagtcctggatcacagccagactgctggcg
gataacaaggcctacgactttctgaggggggcggtgggctttgccatcaggaatgccagg
ctggatggtctggaggggttcctagacaaggtgcacccctcccagacgccagaaaacacc
ctgctcagggagttctgggagtctgtgttccagtgctccttcgaggggggcagcagcacg
ctgtgcacaggaacagagagcttagcaaagctgaagaaccaatacactgacgtgtcagag
ctgagaatatcgagtaaagtttacacagctgtatatgccattgcacacgctctacacaac
ctactgacagacttaaagaatcacacagacagtggcaacataccagtctacacatcacag
caggtgctacagtacctgaaggaggtgaggtttagagtaaagacaggagaggagatctgg
ttcgatgctaacggagatgtggtggcgtgctacgacctagtgaactggcagcaggatgag
aatgggaccctgcagttccatgctgtggggctgtatgattcctcgatgccccctgaacag
cgcattaccttcaacaagagaaaactggtctgggcagggggccaggcagaggcacctgca
ggggtgtgcagtgagagctgtcccacaggcactcgtaaggctgtacagaaaggaaagcct
gtatgctgttatgactgtgtaccatgtgcggagggagagatcagtaatatcacagattct
aacggctgctatcgatgtgacttggattattggtcaaatgaaaaaagggaccgctgtgtg
ttgaaaccagttgaattcctctcctatgaagaaatgatgggcatagttctggtgtttttc
tccttactggggtctggtgttactactctggtagctgttgtgttttcagttcataaggac
acccccatcgtcagggccaacaactctgagctgagcttcctgctgctcttctccttgact
ctgtgttttctgtgttctcttactttcattggccggccctctgagtggtcctgtacgctg
cgccacacagcgtttggcatcaccttcgtcctctgcatctcttgtgttctggggaaaaca
atagtggtgttgatggccttcagtgctacacttccagccagtaatatcatgaaatggttt
ggtcctccacagcagagactcagtgttctggctttcactctcatacaggtcctgatctgt
gctctttggttaacagtctcccctcctttcccctacaagaacatgaagacctataaggaa
aaggtcattctagagtgtgatgttggttcagctattggtttctgggctgtgttggggtat
ataggactcctggctctcttgtgctttgtgctggcttttctggctcgaaagctgcctgat
aacttcaatgaggccaaattcatcaccttcagcatgctcatattctgtgcagtctggatc
acctttatcccagcttatgtcagctctcctgggaagttcactgtagctgtggagatcttt
gctattctggcctccagttttggtttacttttctgcatatttgctcctaaatgtttcatt
atattgctgaggccagagcaaaacaccaagaaacatatgatggggaagacgtccaatgac
atacgatattaa
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