Salvelinus namaycush (lake trout): 120018104
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Entry
120018104 CDS
T07522
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120018104
03012 Translation factors [BR:
snh03012
]
120018104
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120018104
mRNA cycle factors
Stress granule specific factors
120018104
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
eIF-4
120018104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
120018104
NCBI-ProteinID:
XP_038817018
UniProt:
A0A8U0P2C2
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All DBs
Position
Sna23:14885291..14977956
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AA seq
1758 aa
AA seq
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MNKAPQPITGPPSATHPAPSPGLQRATFPPGQPPSVVFATPPPQMNPAPQHRQFAPGPRA
LHQQGGFRSLQPYYSRPSLPSNAPRVPPSSTARPVAPTHVYQPGQQMMMIPSQQIPFPNQ
QGPAYFIPGQYRSTYVATPQQYPVPPGNPGFYPGTSPAEYGTYAGAYYPAQQQYTSSVPA
APVIMNPPPQQQQLPPQQQIHPKRERKQVQIIIRDPNQGGKDITEEIMSGGTRSGTTPTP
PQVSDDSSESSISGSEGPAIAQADWENVTPVVVRPDDRGKPAATLITGPPAPSKTPELVK
TSPAPTEVKLPDTNSKSPSLSQDLPSPPSVTTTLHTTVPTTPQPSTCPIADMMDAPVPAA
VPAPSAPEVPAYPAPLPEPRPTPAAEEHPSAAKKEREEVKEKEEIKEVAEARQKGTTSSK
PEPSLAPVTTPSSSTNGISATQPTPAKEEEPAALSINMPTPQAAEPPPESPIAQPEELRL
PNGLPLPSPQDPEKMCAELSECDVSPIAEPEVAQLQSEAPMPKPTPVAVTAMPAPVVKVT
PAPVAKATPAPVAQATPAPVAQATPAPVAQATPTPIAQATPVLAETATTTVVTAPRVEDE
MDSPPPQSTTPAGESSMQAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVESPPEREQ
ATPTSASDAKEPRPADTPAVEEVDETWEEKEDKLDAENIEPKPEDLKYQYKEELCRPIDP
EEKKRYDRDFLLGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNMGPDF
TPSFANLGRPGMGGGGGGGGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLT
EDVKLNKAEKAWKPAVKKAASGQAAPEEESDDSEEAKTQELFKRVRSILNKLTPQMFQQL
MKQVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLIGLKVPTTDKPGVTVNF
RKLLLNRCQKEFEKDKDDDVIFEKKQKELDAAATEEKDRLKAELEEAKDQARRRSLGNIK
FIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFA
QMDKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKDAELEEHREVLKV
QQQLLNQNTRGGGGGRGGGGGRDQGSRGGQHPQTGQRSQPQDEGWNTVPISTKSRPIDTS
RLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATST
LNRFSALQPQQPSSSGPSHDSDRRVPQRNSSSRDRGSDRFERHDRGSNDRFDRRDDQRDD
RDRNRPTVTKRSFSRETEEHSREREHRGPADPVRRVASMTDDRGSRDRARSKDNVKREAA
PPSAQNKPALSEEMLEKKSTAIIEEYLHINDMKEALQCVVEMNSTPLLFVFVRSGLESTL
ERSPIARERMGLLLHQLYKAGTLPKEQYYRGLQEILEVAEDMAIDVPHIWLYLAELITPM
LHEGGIPMGQLFKEISKPLVPQGTAGVLLVQILTLLCKGMSHKKAGAMWREAGLSWKDFL
PEDEDVNKFVTEKNLVFTLGGGEDDETEKSSKKELSSEELTKQLDRLIQDKAVNQRIYDW
VEANLDETQMSSNVFVRAVMTSICQSAIICENPYKLDAKVITQRAKLLHKYLKDEQKELQ
ALYALQALMVEIEQPANLLRMFFDTLYDEDVIKEEAFYKWESSKDPAEMQGKGVALKSVT
AFFTWLREAEDEESDNNS
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacgggacccccctctgccacccaccctgccccctcc
cccggactccaacgggccaccttccctcctggacaacccccctctgttgtctttgccacc
ccacctccacaaatgaacccagcaccacagcaccgacagtttgcccccgggccccgtgct
ttacaccaacagggaggattcaggtcactgcagccgtactacagccggcccagtctgccc
agcaatgccccccgggtgccccccagcagcacggcaaggcctgtggcgcccacacacgtc
taccagccgggccaacagatgatgatgatcccctcacagcagatccccttccccaaccaa
cagggccccgcctacttcatacccggacagtaccggtcaacgtacgtggccacccctcag
cagtacccggtcccaccgggcaatccaggcttctacccaggcaccagcccagctgaatat
ggcacatatgcaggggcatactacccggcccaacagcagtacacgtcctcagtgccggct
gctccggtcatcatgaaccctcccccccagcagcagcaactacctccacagcaacagatc
caccccaaaagggagcgcaaacaggtacagatcataatacgagaccctaaccagggtggt
aaagacatcactgaggagattatgtcagggggcacccgcagtggcaccacccccacaccc
ccacaggtgagcgacgactcttcagagtcgtctatatctggatcagagggcccagccatt
gcccaggcagactgggagaacgtgacacctgtcgtggtcagaccagatgaccgagggaaa
cctgcagccactctcataacgggccccccagccccgtctaaaacccctgaactggtcaag
acttcccctgccccaacagaggtcaaactcccagacacaaacagtaaatccccttcctta
tcccaggacctaccctcacccccgtcggtaactaccaccctccacactactgtccctact
accccccaaccctcaacttgtcccattgcagacatgatggacgctccagtcccagccgct
gttccagccccatctgcccctgaagtgcccgcttaccctgcacccctgcctgaaccccgc
cccactcctgcagctgaggagcatccctcagctgccaagaaggagcgggaggaagtgaag
gagaaagaggagattaaagaggtggcagaggctaggcagaaggggactacatcatccaaa
cctgagccttcccttgctccagtgaccacccctagcagcagcactaatggtatctctgcc
acccagccaaccccagccaaggaggaggagccagcagccctgtccatcaacatgcccacc
ccccaggcagcagaaccccccccggagtctcccatcgcccagccagaggagctcaggctg
cccaatggcctgccgctccccagcccccaggaccctgagaagatgtgtgcggagttgtca
gagtgtgacgtcagccccatcgctgagcctgaggtggcccagttacagagcgaggcaccc
atgcctaaaccgacgcctgttgcagtcacagcaatgcccgcccccgttgtcaaggtgacg
cccgcccccgttgccaaggcgacgcccgcccccgttgcccaggcaacgcccgcccctgtt
gcccaggcgacgcccgcccctgttgcccaggcgacgcccacccccattgcccaggcgacg
cctgtcctagctgagactgctactactacagttgtaactgctccccgtgtggaagacgag
atggactctccaccaccacagagcaccaccccagccggggagagttctatgcaagctgct
gtttctgtgccaaagaaaaagaggaagatgaaggatctgaacaagaaggaggctgttgga
gacctcctggatgcctttaaggaggagcaggtagtggagagccctcctgagcgagagcag
gccacacccacttctgcctctgacgctaaggagccccgcccagccgacacccctgcagtc
gaagaggtggatgagacgtgggaggagaaggaggacaaactggatgcagagaatatcgaa
cccaagcccgaggatctgaagtaccagtacaaagaggaactatgtaggcctatagaccca
gaggagaagaagaggtatgacagggacttcctgctgggcttccagttcatcagtgccgcc
atgtccaagcctgagggcctgcctcagatcagtgacgtggtgctggacaaggcgaataag
gcccctctccgccagctggaccccagccgtttgccagggatgaacatgggccccgacttc
acaccctcgtttgccaacctgggcaggcctggaatgggaggaggaggaggaggtggtgga
ggtggaggtggccacagaggaggaccaccctctggtatgggtggtggaggaccgcgtcgc
tcccagcagggccagcgtaaggagcccaggaggatcatcaacatctcttcgtctctgacg
gaagacgtgaagctcaacaaggctgagaaggcctggaagcccgctgtcaagaaggctgcc
agtgggcaagctgctcctgaggaggagagcgacgactcggaagaggccaagacccaggag
ctgttcaagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacagctg
atgaagcaggtcacagagctgaccatcgatacagaggagaggctgaagggagtgatagat
ctgatctttgagaaggccatctctgaacccaacttctccgtggcctacgccaacatgtgc
cgctgccttattgggctcaaagtccccaccacagacaagccgggagtcactgtgaatttc
cgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggacgatgatgtc
atctttgagaagaagcagaaagagctggacgctgcagccacggaggagaaggatcgcctg
aaggcagagctggaggaggccaaagaccaggcgcggcggcggtcgctaggcaacatcaag
ttcattggtgagctgttcaagctgaagatgctgacagaggccatcatgcacgactgcatc
gtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgtagactcttgtca
actatagggaaggacctggactttgaaaaggcgaagccacgtatggaccagtactttgcc
cagatggacaagatcatcaaggagaagaagacatcgtccagaatccgcttcatgctgcag
gacgtactggacctcaggaggaacacgtgggtccccaggagaggagagcagggccccaag
accatagaccagatccataaggatgctgagctggaggagcacagggaggttctcaaggtg
cagcagcaactcctcaaccagaacacccgaggaggaggtggaggacgtggtggtggtgga
ggaagagatcaggggagccgcgggggccaacacccccagacgggccaaaggagtcagccc
caggatgagggctggaacacagttcccatctccaccaagagcagacccatcgacaccagc
cgactcagcaagatcactaagcccggggctttggacttcaacaaccagctgctggcgccc
cagctcgggggtaagggcatgtggggcagctggggcaagggcagcagtggaggcaccacc
ggagcaaaacccgctggtgaagccaccccagagtcaggaggccgcccagccaccagcacc
ctcaacaggttctcagcattgcagccacagcagccctcctcctcagggccctcacatgac
tcggacagaagagttcctcagaggaacagctcgagtcgggaccgtggcagcgacagattc
gagcgtcatgaccgtggcagcaacgaccgcttcgacaggcgggacgaccagcgagacgac
cgggacaggaaccggcccacggtcaccaagcggagctttagcagggagacggaggagcac
agcagagagagggagcaccgcggccctgctgatcctgtacgccgcgtagccagcatgacc
gacgaccggggcagcagagaccgagccaggagcaaagacaatgtgaagagggaagctgct
cccccttctgcccagaacaaacctgccttgagtgaagaaatgctggaaaagaagtccaca
gctatcatagaggagtacctacacatcaacgacatgaaggaggcgctgcagtgtgtagtg
gagatgaacagcaccccgctgctctttgtgtttgtacggagcggtctagagtccactctg
gagcgcagccccatcgccagagaacgcatgggcctgctgctgcaccagctgtacaaggca
gggaccctgcccaaagagcagtactacagagggcttcaagagatactggaggtggcggag
gacatggccatagacgtcccccacatctggctctacctggctgagctcatcacccctatg
cttcacgaaggaggcatccccatgggacagctcttcaaggagatatccaagcccctggtt
cctcaggggacggctggagttctgctggtccagatcctcaccttactctgcaaaggaatg
agccataaaaaggcaggtgccatgtggagggaggcggggcttagctggaaagactttctg
cctgaggacgaggacgtcaacaagtttgtgacagaaaagaatttggtgttcaccctggga
ggaggagaagatgatgagacagagaagagcagtaagaaagagctgagctcagaggagctg
accaaacagctggacagactcatacaggacaaggctgtcaaccagaggatctatgattgg
gtcgaggctaacctggacgagacgcagatgtcctccaacgtgtttgtcagagcagtcatg
acatccatctgccagtcggccatcatctgtgagaacccttacaagttggatgcgaaggtg
atcacccagagggccaagctgctccacaagtacctgaaagatgagcagaaggagctgcag
gctctctacgccttgcaggccctcatggtggagatagagcagcctgccaacctgctgcgg
atgttctttgacacgctgtacgatgaggacgtgatcaaagaggaggccttctacaagtgg
gagtccagcaaggaccccgcagagatgcagggcaagggtgtggccctgaagtccgtcacc
gccttcttcacctggctccgtgaggccgaggacgaggagtctgacaacaacagctag
DBGET
integrated database retrieval system
