Salvelinus namaycush (lake trout): 120018129
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Entry
120018129 CDS
T07522
Name
(RefSeq) tsukushin-like isoform X1
KO
K08130
tsukushi
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120018129
Proteoglycans [BR:
snh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120018129
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_LRWD1
LRR_14
LRR_EndoS
LRR_RPS2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
120018129
NCBI-ProteinID:
XP_038817060
UniProt:
A0A8U0P2P9
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Position
23:17427134..17436020
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AA seq
354 aa
AA seq
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MVKSMMAFPLCVSLWLLLAVHGQAGAVKNCHPSCHCEVESFGLFDSFSLTRVDCRGVGTS
PIPIPLDTAHLDLSSNSMSLLTDNMLSGPGYTTLVSLDLSNNRISMVSPKALSRLRYLES
LDLSHNFLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFITKGHGEPINVDLSHNQLTVV
SRSSSRSPLLHVQSLTLAANQLRAVPKLKGIPLRDLSLDGNIILRIEEGAFEDLKDLVHL
SLSALPELSDIQPNSFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVTSL
PNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEVLTCDVKGIVS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagagcatgatggcgttccccctgtgtgttagtctgtggctgctcctggctgtc
catggccaggctggagctgtgaagaactgccacccaagctgccactgtgaggtggagagc
ttcggcctgttcgacagcttcagcctgaccagggtggactgcaggggagtgggcaccagc
cccatccccatccccctggacacggcccacctggacctgtcctccaactccatgtccctg
ctgaccgacaacatgctctctggacctggctataccaccttggtcagcctggacctcagc
aacaaccgcatttccatggtcagccccaaggccctgtccaggctgcgctacctggagtct
ctggacctcagccacaacttcctggagggcctggatgagggctgcttctctggcctccct
ctggccgaggtggacctcagccacaaccacttccgggagtttgacctcgatatgttcatc
actaaaggtcacggagagccaatcaacgtggatctgtcccacaaccagctgacggtggtc
tccaggagttcctctaggagccctttgctacatgtccagagcctgactctagcagccaat
cagctgagggccgtgcccaagctaaaaggcatcccgttgagggacctaagcctggatggg
aacattatcttgcgcattgaggagggggcctttgaggacctcaaggacctggttcaccta
tccctcagtgcgcttcctgagctctctgacatccagcctaacagtttcagaggccttcag
aaccttcaggtcttggacctgtccaacaatgccaagctaaagacactgagcccagctgtg
ttcagtggacttgtgtctctacaggagctcaatctgtccaactctggtgtaacgtcattg
ccaaataacatgctaagtcacttgccaagcatcaagagtattaccctgggccagaatatc
cattgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaacagaaa
catgacgaggtgctaacctgtgacgttaaaggcattgtgtcgtga
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