Salvelinus namaycush (lake trout): 120018163
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Entry
120018163 CDS
T07522
Name
(RefSeq) CD166 antigen homolog A-like isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120018163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120018163
04090 CD molecules [BR:
snh04090
]
120018163
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Other
120018163
CD molecules [BR:
snh04090
]
Proteins
120018163
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_PDGFR_d4
PKD
UDG-inhib_P56
Syndecan
DUF6773
Motif
Other DBs
NCBI-GeneID:
120018163
NCBI-ProteinID:
XP_038817128
UniProt:
A0A8U0TIR7
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All DBs
Position
23:complement(20277416..20357764)
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AA seq
560 aa
AA seq
DB search
MHFSSCLCTLLVALVYQVSAMDTVIGLYGETVEVPCNNGAPKPKDLFITKWKYDNGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAASLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALAAELEIGKPTQLGQCSAPDANPAANITWFKNKKHLVADGKGIIISSKVK
VDEVTGLTTTSSTLQYTAEKGDTDALFTCGALNALSSPVSFTVTYPTERVSLHVISKGPL
MEGDNVTLKCKADGNPLPTSFNFHIQRKVVKVENSDSYTVTDVTRDSTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVMKSTGESLALNLQTDASGELRVSWTKDNGKLDKIPKFD
KLTYSDSGKYEVVVTMGALIKKASFELVVEGIPVIRRLAKQRGEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKISHKLTIVPTVNLTVVCTVSNELGQDTRAINVSTLFEEV
RMDKQGSSDDSDTTKLVVGVIVGLLLATVVVGLAYWLYLKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcacttttccagctgtctgtgtaccctcctcgtcgcgcttgtctaccaagtgagcgct
atggatactgttatcggcctgtatggagagaccgttgaggtgccatgcaacaatggagcc
cccaaaccaaaggacctgttcataacaaaatggaaatacgacaatggagacctgctgacc
cagctgaaagaccaggatgcctctgtcatagccactgacaagtacaaagaccgtgtcagc
atggccgaaaactccagcctgctgattgctgcagcatcactgaaggacgagaagactttc
acctgcatggtggtggctggggctgacatctcagaataccctgtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccgcagagctggagattggcaaacca
acccagctagggcagtgcagcgcccctgatgccaacccagctgccaacatcacatggttc
aagaacaagaaacatctggtggcggatgggaaaggcattataatcagttccaaagtgaag
gtggacgaagtcactggcctcaccaccacttcctccactcttcagtacacagctgagaag
ggagacacagatgctctgttcacctgtggggccctgaacgcattgtcctccccagtctcc
ttcactgtcacctaccccacagagagggtcagtctacatgtcatttctaaagggcccctt
atggaaggagacaacgtgactctgaagtgcaaggccgacgggaacccacttcccaccagc
ttcaacttccacattcagagaaaggtggtgaaggtggagaactctgactcctacactgtg
actgatgtcacacgtgacagcacaggggaatacaagtgttctatcattgacaatgccaag
atggaagactccaagaacattaccatcaattacctggatatgagtttgagcccctctggg
aaggtcatgaagagcaccggcgaaagcttggctctgaacctgcagaccgatgcgtctgga
gaactcagggtgtcctggactaaggacaatggcaaactagacaaaatccctaagtttgac
aagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggcgctctcatc
aagaaagcctctttcgagctggtcgttgaaggtattccagtcatccggcggttggccaag
cagcgtggcgaggacggccagcacaaggtactgacctgcgaggctgagggctcccccaaa
cccactgtggcctggagcgtcaacggcacctcggctgatgaaagtccctacgtcaatggg
aagatctcacacaagctgaccattgtgcctacagtcaacctgaccgttgtctgcactgtg
tccaatgagcttggccaggacaccagggctattaacgtgtcgaccttatttgaggaggtg
agaatggataaacaaggctcatcagatgacagtgacacaacaaagttggtggtgggagtt
attgttggtctgctcctggccactgtagttgtgggtctagcatactggctgtacctgaag
aaatccaagcaaggcagctggaagactggtgagaaggaggatggatccactgaggagagc
aagaaacttgaggagaaaatagaggagaagctggaggaaaacagccagaaagttgaggtg
taa
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