Salvelinus namaycush (lake trout): 120018206
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Entry
120018206 CDS
T07522
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120018206
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120018206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120018206
04090 CD molecules [BR:
snh04090
]
120018206
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120018206
CD molecules [BR:
snh04090
]
Proteins
120018206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
Ig_2
I-set
MINT_RID
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120018206
NCBI-ProteinID:
XP_038817205
UniProt:
A0A8U0TIG1
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Position
Sna23:23428041..23503661
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AA seq
558 aa
AA seq
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MAKRLLLDYHKSLPLNGLQASTVLLLIYGFTCVCSNEVLVPERVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFLNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASTTVNILVEPKVYVSAGSTALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTSTTQVRYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQDNVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFTFTRPLERNDSGLYRCEVSNDIGPRGQDVHVWIQDPPPTTAPVATTSTPLFLDTSDT
STAPNKRRGASGHSTSPTLSSQSDSSLGTIVGGAVGGVLFLVLLLILAGACFMRQRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDGQNSTYKGSQELKPKPGLGGDIIYPN
DIQDRDDWGDGHRGLREGSYFPAENQNTIHHPRGLPVHTPTVTNGSPYLPEDCFDNGTDS
EYVSHMDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctactcgattatcacaagagtctgccgctcaatggactgcaagct
tctacagttttgcttctcatatatgggtttacctgtgtgtgcagtaacgaggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgttttcaacccccagtttggcatctccatctctccagactacgccaggcgc
ctgtccttcctgaacccctccgtgcacgatgccaccatcgtcctggaaggcgtgggattt
caggacatcgggtcttacacgtgtaaagtggcgactttcccactgggcaacacgcaggca
tccaccaccgtcaatatactagtggagcccaaggtctacgtctccgccggctctacggcc
ctggtggatggtggtaatgaatcggtggcggccacctgcatagcagagcgcggccgacct
gcagccgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctccaccacgcaggtgcgctacgtgttggagccacggagacactcc
cagggccacacgctcacctgcgtggtgcgccacccagccctgcagactgagttcaggata
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtgggatatgaccagaac
tggtttgttggtcaggacaatgtgaagctggactgtggagccaaagccaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttactttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtccaatgacatcggtccacgcggtcaggacgttcatgtttggatacaagatcctccc
cccaccacggcaccagtcgccacaacctctactcccctcttcctggacactagtgacacc
agcacggcccccaacaagcgtcgaggagcgagcggccactccacctcacccactctgtcc
tcccagtcagacagcagcctgggtaccatagtgggcggggctgtgggtggggtcctgttc
ctggtgctgctgctgatcctggccggagcctgcttcatgcgccagcggaggaccttcagg
ggggactactacaccaagcagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccacgagctgcaggaggtctacggggacgggcagaactctacctac
aagggcagccaggagctgaaacccaagccgggactgggaggggacataatttaccctaac
gacatccaggacagggatgattggggcgacggccacaggggcctccgggagggcagctac
ttccctgctgagaaccaaaacaccatccaccaccccagagggctgcccgttcacaccccc
acagtgaccaacggctctccctacctgccggaggactgctttgacaacggcacagacagc
gaatatgtgtcccacatggatgggtctgtgatctcacgcagggagtggtatgtctga
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