Salvelinus namaycush (lake trout): 120018343
Help
Entry
120018343 CDS
T07522
Name
(RefSeq) ARF GTPase-activating protein GIT1-like
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04517
IgSF CAM signaling
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120018343
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120018343
09142 Cell motility
04810 Regulation of actin cytoskeleton
120018343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120018343
Membrane trafficking [BR:
snh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120018343
Endosome - Golgi transport
Arf GTPase associated proteins
120018343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
120018343
NCBI-ProteinID:
XP_038817413
UniProt:
A0A8U0TJ18
LinkDB
All DBs
Position
23:complement(34240199..34263223)
Genome browser
AA seq
670 aa
AA seq
DB search
MSRKVHRTEVCADCSAPDPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPAL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLSFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGALDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLSSPTDSSLDLGADDDQHDYDSVASDEDTDSELTTQNNNNAQRNNRAKSMDS
SDLSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEVRKGGPGGPTPYG
GSHLSGSMEMGRYMGPKGEKHGSGTDSDYDNTHMYELSLRGRSSEEEGRGDSEEWGGGEG
GEPDPTLPCTEDVILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKR
PALDAVHCSLRLLASSASRLQVECRKAAPSDPSAPAVDYQLLTQQVIQCAYDIAKAAKQL
VTITTREKKQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaggtccacagaaccgaagtatgtgccgactgcagtgcaccagatccgggc
tggaccagcatcaacaggggcgttctgatctgtgacgagtgctgctctgtgcaccgcagc
ctgggacgccacatctccatcgtcaagcacctgcggcacagcggctggccccctgcactg
ctgcagatggtgcagaccctggccagtaatggggctaactcgatttgggagcactccctg
cttgacccagcgcaggtgcagagcggccgcaggaaacctaacccacaggacaaagtccac
cccaccaagtccgagttcatccgcgccaagtaccagatgctatccttcgtccacaagctg
ccgtgccgcgatgacgacggtgttaccaccaaggacctcagtaagcaactgcactccagt
gtgaggacggggagtctggagacatgtctacggctgctgtccctgggagcacaggccaac
ttcttccacccggagaagggcaccactccactccacgtggcagccaaggcaggccaggtt
ctgcaggcagagctgctggtcgtgtacggagccgaccccggagccctggacatcaacgga
cgcacacccatggactacgccaggcaagcgggccaggtggagctggcagagcggctggtg
gagtgtcagtacgagctcacagacaggctggccttctacctgtgtggccgacgccctgat
cacaagaatgggcattatatcattcctcagatggctgacagagctcgccctaagtgtccg
acacagagcctggacctctcagaactggccaaggcagctaagaagaagctgcaagcgctg
aacaatcgattgtttgaggagcttgccatggatgtgtatgacgaagtggaccgcagggag
aacgatgcagtgtggctgacgactcagaaccacagtactctggtgacggagcgcagtgcg
gtgcccttcctgcctgtcaaccccgaatactcagccacacgcaaccagggtagacagaag
ttggcccgttttaacgctcgtgagttcgcaacgctgatcatcgacatcctgagtgacgcc
aagaggagacaacaagggaaaggccttagcagccctaccgactctagtctggacctgggg
gccgacgacgaccagcatgactacgacagcgtagcgtcggacgaggacacggacagcgag
ctgaccactcagaacaacaacaacgcacagcgcaacaaccgggccaagagcatggactcg
tcggacctgtcggacgggcccatcactctgcaggagtacctggaggttaagaaggccctg
gcctcctccgaggctaaagtccagcagctgatgaaggtcaacaacaacctgagtgaagag
ctgcgccggctgcagaaagaggtgaggaaggggggtcctggcggtccaacaccctatgga
gggtcgcacctctctggctccatggagatggggagatacatgggccctaaaggagagaag
cacggcagtggcactgatagtgactatgacaacactcacatgtatgagctgtcgctaagg
gggcgcagcagtgaagaggaaggccggggggattcggaggagtggggtgggggtgaaggg
ggtgagccggaccctaccctgccctgcaccgaagacgtcatcctcaagacggagcaggtg
accaaaaacatccaggagcttctgagggccgcacaagagttcaaacacgacagttttgtt
ccatgctccgagaagatccactctgctgtcactgaaatggcctctctctttcccaagcgg
cctgccctagacgctgtgcactgctccctgcgcctcctggcatccagcgcctcccgcctc
caggtggagtgtcgcaaggcggctccctcggacccatcagcgcccgccgtcgactaccag
ctgctcacccagcaggtcatccagtgcgcctatgacatcgccaaggccgccaagcagctg
gtcaccatcaccacccgcgagaagaaacagtga
DBGET
integrated database retrieval system
