Salvelinus namaycush (lake trout): 120018384
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Entry
120018384 CDS
T07522
Name
(RefSeq) hepatocyte nuclear factor 3-beta-like
KO
K08038
forkhead box protein A3, hepatocyte nuclear factor 3-gamma
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120018384
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
120018384
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Forkhead_N
HNF_C
Motif
Other DBs
NCBI-GeneID:
120018384
NCBI-ProteinID:
XP_038817482
UniProt:
A0A8U0P396
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Position
Sna23:35773880..35778584
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AA seq
439 aa
AA seq
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MLSSVKMESHELPEWNAFYSEASEMYASPTAMNSMSSMSTINSYINLNPAGSPATMNMGY
GSSGLNSQLASMGGGANHMNLSPVTSSLNPSSLSQLGSPGPSLGSLSHYQNMGQPMSQLS
YPSPTSLNRAKEVPKPYRRSLTHAKPPYSYISLITMAIQQSGSKMLTLNEIYQWIMDLFP
YYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPNSGNMFENGCYLRRQKR
FKIDQEKAAKKSGKTQEGGSVKGGHGDSLMEEHSPAGGSEGADSAHSDNSHPGSSSEELQ
QRSMVQLDCPQQPQSHVQSTPVAITSSLPSSTPLLHSQVMGGSPHLLPSAMHNLDLQNDP
HKAMDPHYNFNHPFSITNLMSNEQKMDLKTYQDQVMAYNGYASSSPIAAKQIYDSAGPSV
MDSGAYYQTLYSRSVLNAS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctcagtgaagatggagtctcatgaactgccagagtggaatgccttctacagc
gaagccagtgagatgtatgcctctcccactgccatgaattcaatgagttcaatgagcacc
atcaacagctacatcaacctgaacccagctggttctccagccaccatgaacatgggctat
ggcagctctgggctcaacagtcaactggcgtccatgggcggaggagccaaccatatgaac
ctgtccccggtgacttcatccctcaaccccagctctctctcccagctgggctccccaggc
ccttccctgggctccctctcccactaccagaacatgggccagcccatgagccagctgagc
tacccctctcccacctccctcaaccgggccaaggaggtgcccaagccctaccgccgctca
ctgacccacgccaagccaccttactcctacatctccctcatcaccatggccattcagcag
tccggcagcaagatgctcaccctcaatgagatctaccagtggataatggacctgttcccc
tactaccgcgagaaccagcagcgctggcagaactccatccgccactcgctgtccttcaac
gactgcttcgtcaaggtggcccgctcgcccgacaagcccggcaaaggctcctactgggcc
ctgcaccccaactcaggcaacatgtttgagaacggctgctacctgcgccgccagaagcgc
ttcaagatcgatcaagagaaggctgcgaagaagtctggcaagacccaggagggaggctcg
gtgaaagggggccatggagacagcctgatggaggagcacagcccagcggggggctcagag
ggggccgactcggctcactctgacaactcgcaccctggttcctcctcagaggagctgcag
cagaggagcatggtccagctggactgcccccaacagccccagtcccacgtccagagcacc
cctgtggcaatcacctcctccttgccctcctccacccctctcctccactcccaggtcatg
ggaggcagcccccatctcctcccgagcgccatgcataatctggacctgcagaacgaccct
cacaaggccatggatccccactacaacttcaaccaccccttctccatcaccaacctcatg
tccaatgagcagaagatggatctgaagacgtaccaggaccaggtgatggcctacaatggc
tacgcctcctcctctccgatagcagccaagcagatctacgacagcgcaggaccctcggtc
atggactctggggcctactaccaaaccctctacagccggtcggtcctcaatgcctcctaa
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