Salvelinus namaycush (lake trout): 120018388
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Entry
120018388 CDS
T07522
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120018388
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120018388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120018388
NCBI-ProteinID:
XP_038817488
UniProt:
A0A8U0TJ44
LinkDB
All DBs
Position
23:complement(35997228..36046764)
Genome browser
AA seq
1909 aa
AA seq
DB search
MLQLRPRFRLLPLLYLCFVFFPLPARNQTAGHRGGTAAGRRGAERIKVLFTPTVCKVRCT
QGRCTNFCEQGNVTALYISEQGDRAAVGPGFRVFLCPMLCQNGGVCIQKDRCLCPPTFTG
KFCHIPVATPSTNDIEKPPRSPSVLASQQLLTQSEYILPLQSQQQSHSQPSGASGSSMVK
VRVQHPPEASVKIHQVLKVGYGPDTVREQSETVTWSAGLSGASTSVLPGERAAATPPKPR
VQAQTLHGNSTYTESSVFKYCFREVHNGQCRSPLPGLRSQDTCCRGIGLAWGINECVLCP
PNTGNGVDGSCPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGYILDAS
HGICISHKVISEDKGQCYRILSSGSGPGSCYVPILRNITKQICCCSRVGKAWGKNCKRCP
YFGSVAFKEICPAGPGYHYSASVIQFNQRLLEQYGTGGPPVISQRTGQNRPQQPASSGAQ
TPQTSHQQSSGSLTPQTRPQQPGITTLLTTPTRPQQPGGGGSLSSQGRPHIPTSSVTAGP
TRVVTARPPTQTQWPPVDRRPVSPVRPAQPLPSLVTPRPPIPRPVRGVCETMPQVCGQGR
CVDQPGGRHTCICNEGYQLNAQQTRCQDIDECTASSPPCGSGRCQNTEGGYRCSCPSGYQ
PGPQGTSCIDVNECLRTPSPCSVGECDNTPGGYRCVCPAGFRANFKQTQCQDIDECRQVP
NPCNNGRCENIPGSFKCVCRTGYKLEGNTCKDVDECEDPLRCPVQACVNSPGLYKCVSCP
PGFGLLNEQCSDVDECRQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKTCTDVDECEDPL
RCPGQACVNSQGSYNCVSCKPGFSMINGQCSDIDECGQTPSPCTTGHCENTQGSYSCACL
TGYRLHGDTCRDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGLVDRHCTDVDECLHIP
TPCAYDRCENTAGSYKCACRSGFRLQGNTCGDVDECENALQCPGQECINSEGSFKCVACS
PGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYQCVCRTGFKLQDSICIDIDECEDPS
QCPGQRCVNSEGSYKCVACKAGHGMQDGLCADVDECQSPDTCGVARLCVNTDGSYRCDCQ
PGYRTAGLGRQCRDVNECLEGEYCFPKGECVNTEGSYRCVCSQGYTTSSNGSSCLDVDEC
ARSGPGACQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQRCENTIGS
YRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYTATSDGKG
CVDENECETMQGVCGAARCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGRPAFPGGGS
SSSSSSTTGLGPQRWLDASQLPPARPGELRECYYNTEEQSSCSVLARNTTQQECCCTVGQ
GWGMGCQYDPCPQLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCVNN
IPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGICLNILGSYFCSCEPPLVLDDTR
RSCVNSTGLAVDENLSFCWEYVTADLVCQSPLLGRQVTFTECCCLYGEGWGLQCALCPAR
DSEDYDARCNVFLRLPEFPPPFPDRYGPDPGPGPGRGGGVGYRVPYGPDSFPDPIPRRPE
YPQPDYDDYTPPGGSRSGFRSRTPSTFSVPESPYRRPSGYIPERHYDEDDYGPPDAPPRP
HFRTLPDPRSELAFGARPLPPSREGLPLSLAPLPDSDPYSEEERPEPWRVGPPFPPFPDR
QGPGGGGGGPRRVYERRYEPYAGLSTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMT
SMACIDINECVDPDNACANGQCIDTDGSYRCVCHRGYVMSRRPNRCVAA
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcagacccaggttcaggctcctaccgctgctctacctctgcttcgtcttc
ttcccccttccagccagaaaccagaccgccggccaccgaggaggaacagcagcaggaagg
agaggagctgagcgcatcaaggtgctcttcaccccgaccgtctgcaaggtgcgctgcacc
cagggacgctgcaccaacttttgcgagcagggcaatgtgaccgctctctacatcagtgaa
cagggggaccgggctgcggtgggaccgggcttcagagtcttcctgtgccccatgttgtgt
cagaacggaggggtctgcatccagaaggaccgctgcctctgcccaccaaccttcaccggc
aagttctgccacatccccgtggccacgccctccaccaatgacattgagaagcctccgcgc
agcccctcggtgctggccagtcagcagctgctgacccagtcggagtacattctccccctg
cagagccagcagcagagccacagtcagcccagcggtgcatctggctcatccatggtgaag
gtgcgggtgcagcacccaccagaggccagcgtgaagatccaccaggtgctgaaggtgggc
tatgggccagacacggttcgggagcagtcggagacggtgacctggtcagcaggcctctcg
ggggccagcaccagtgttctgccaggggagagggccgcagccacaccacctaaacccaga
gtccaggcccagaccctccacggtaactccacctacacagaatcttctgtgttcaagtac
tgcttcagggaggtccacaacggccagtgcagatcacctctcccaggactcaggagtcag
gacacctgctgcagagggattggactggcctggggcatcaacgagtgtgtcctatgtccc
cctaacacaggaaatggagtcgatgggagctgtccggctggatttgagaggatcaacggc
acccagtgtgttgatgttaatgagtgtttgcagccaggcttctgtgagaacgggaactgt
gtgaacactcgggggagctacagttgtgtctgcaggcaaggatacatactggacgcctct
cacgggatctgtatctcccataaggtgatctcggaggataagggccagtgctatcgtatc
ctgagctctggctctggccctggtagctgctacgtgcctatccttaggaacatcaccaag
cagatctgctgctgcagccgcgtgggcaaggcctggggcaagaactgtaagaggtgtccc
tactttggatcagttgctttcaaggagatctgcccagcagggcctggctaccactactct
gcctctgtcatccagttcaaccagaggttgctggagcagtacgggactggaggtccacct
gtcatatcccagagaacgggacagaacaggccacaacaaccagccagtagtggtgcacag
actccccaaactagtcaccaacaatcttcaggctctctcactccccaaaccaggcctcaa
caaccaggtatcactactctgctcacaactccgaccagaccccaacagccaggtggtgga
ggctccctgtcctcccagggcagaccacacatcccaaccagctctgttacagcaggaccc
acccgggtggtgacagctcggccccccactcagacccaatggcctccagttgaccgacgg
ccagtatctccagtgagacccgcccagcccctcccatctctggtcacgccccgcccaccc
atccccaggccagtgcgtggtgtgtgtgagaccatgccccaggtgtgtggacagggccgt
tgtgtggaccagcccggagggagacatacctgcatctgtaacgagggataccaactcaac
gctcagcagactcggtgtcaagacatagacgagtgcacggcgtcttctccgccctgcgga
agcggccgctgccagaacacagaagggggctacaggtgcagctgtccctctggataccag
ccgggaccccagggcaccagctgtatagatgtcaatgagtgcctccgcacccccagtccc
tgttccgttggggagtgtgacaatacaccaggcggctacaggtgtgtgtgtcctgctggt
ttcagagccaacttcaaacagacgcagtgtcaagatattgacgagtgtcggcaggttccg
aacccctgtaacaacggccgctgtgagaatatccctggtagcttcaaatgtgtctgccgc
actgggtacaagctagagggcaacacatgtaaagatgtggatgagtgtgaggaccccttg
aggtgtcctgttcaggcctgtgtcaactctccaggattatacaagtgtgtgtcttgcccg
ccaggctttggcctgctcaacgagcaatgctcagatgttgacgagtgccgtcagaccccc
agcctttgcaccaatggtcgttgtgagaacactcctgggagctacaggtgtgtttgccac
acaggatacaaactgcaaggcaagacctgcacagatgtggatgagtgtgaggaccctttg
aggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgtgtgtcctgcaag
ccaggcttcagcatgatcaatggacaatgctcagatatagatgagtgtggtcagaccccc
agcccgtgcaccaccggtcactgtgagaacacccagggtagctacagctgtgcgtgtctc
actggctacagactacacggtgatacctgtagagacgtggatgaatgtgcagacccgtcc
cagtgccctggccaggagtgtgtgaactccctgggctcatacaagtgtgtgtcctgcaag
ccaggctttgggctggtcgacagacactgcacagatgttgacgagtgcctccacatcccc
actccctgtgcttacgaccgttgtgagaatacggctggaagctacaagtgtgcgtgccga
tctggcttcaggctacagggcaacacctgcggagatgtggatgagtgtgagaacgctctg
cagtgtcctggtcaggagtgcatcaactctgagggctccttcaaatgtgtggcatgtagc
ccaggctttgaggctggaaacggacagtgtacagatatcgatgagtgtcgccagacctcc
aacctatgtgccaacggtcgctgtgaaaacaccccgggtagctaccagtgtgtttgtcgc
accgggttcaaactacaggacagcatctgtattgacattgatgaatgtgaagacccctca
cagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtgtcgcctgcaaa
gctggccacggtatgcaagatgggttatgcgcagatgtggatgaatgccagagccctgac
acctgtggtgtagcgaggctgtgcgtgaacacggacggctcctaccgctgtgactgtcag
ccaggctacagaaccgctggcctcggacgccagtgtagagacgtcaatgagtgtctagag
ggggagtactgcttcccaaagggagagtgtgtgaacacagagggctcctaccgctgtgtg
tgctcccagggatacaccaccagcagcaacggaagctcctgcctggatgtggatgagtgt
gccaggtcaggcccgggggcgtgccaggatgggcgctgtgtcaacacagagggctcctac
cagtgccagtgccaagtgggattcaccaccaacccagagaagacagcctgtctggatgta
gatgagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaacaccattggctcc
taccgctgtatcacctcctgtgagccgggctaccgggtcacccgcaccggagagtgcgtc
gatatcaatgagtgtgccaatgaaactgtatgcggggagcatgcattctgccagaaccta
attggaacataccagtgcatgtgtgaccagggctacacagccaccagcgatgggaaggga
tgtgtggatgaaaacgagtgtgagactatgcagggcgtgtgtggcgcggcgcgctgtgag
aatgtggatggttccttcatgtgtgagtgtccaggagagggggaggagtttgatacgcgc
tcaggacagtgcctcagcacaccccgaccaggtcgtccagcattccctggcggcggctcc
tcttcttcgtcttcctccaccaccggtctcggtccccagcgttggctcgatgcgtcccag
ctgccccctgcccggcctggcgagttgagggagtgctactacaacaccgaggagcagagc
tcgtgcagcgtgctggcccgcaacaccacccagcaggagtgctgctgcaccgtgggccag
ggctggggcatgggctgccagtatgacccctgtcctcagctaggcacagccgagcaccag
gcgttgtgccccagcggacgaggatatgttaccgggccaggagcatttagctacaaagat
gtggatgagtgtaagctgttccaccctgaggtgtgtaagagcggtgtatgtgtcaacaac
atccctggctactcctgctactgcaccattggctactactacgacgacgtgtttctggag
tgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgcctc
aacatattaggctcatacttctgttcctgcgagccccctcttgtgttggacgacactcgg
cgcagctgtgtcaattccactggcctcgccgtggatgagaacctatcgttctgctgggag
tatgtcacagcagacctagtgtgtcagagccccctgctgggcagacaggtcaccttcact
gagtgctgctgtctgtatggagagggctggggactgcagtgtgctctgtgtcctgccaga
gactcagaggactatgacgctcgctgtaacgtcttcctgaggctcccagagttccctccc
cccttccctgaccgctacgggccggacccagggccaggacccggcagaggaggaggagtg
gggtatcgcgtgccctatggaccggactccttcccagaccccatcccccgcaggcctgag
tacccccagcctgactatgacgactacacaccaccagggggcagcaggtctggcttcaga
agcagaacgcccagcacgttcagcgtcccagagagcccatacagacggccctcaggatac
attcctgagcggcactatgacgaggacgactacggcccgcctgatgctcctccgagaccc
catttccggaccctcccagaccctcgttctgagcttgcctttggggcgcgaccccttccc
cccagccgagagggcctccctctgagtctggcccccctcccggacagtgacccctatagt
gaggaggagaggccagaaccctggcgtgtgggaccccctttccctccgttccctgacaga
caggggccaggtggtggtggtggtggcccacggagagtctatgagagacgatatgagccg
tatgcaggcctgagcacagaggactgtgggatactgcacggctgtgagaacggcaggtgt
atccgggtggcggagggatacacgtgtgactgctacgagggctacgagctggacatgacc
tccatggcctgcatagacatcaatgaatgtgtggatcctgacaacgcgtgtgcgaacggc
caatgcatcgacacagacggctcctatcgctgtgtgtgtcaccgaggctacgtcatgtct
cgtcggcccaaccgctgtgtggcggcataa
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