KEGG   Salvelinus namaycush (lake trout): 120018436
Entry
120018436         CDS       T07522                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04120  Ubiquitin mediated proteolysis
snh04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120018436
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    120018436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120018436
   03400 DNA repair and recombination proteins [BR:snh03400]
    120018436
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     120018436
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120018436
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 RhgB_N DUF6655
Other DBs
NCBI-GeneID: 120018436
NCBI-ProteinID: XP_038817559
UniProt: A0A8U0TJD5
LinkDB
Position
Sna23:41845515..41863826
AA seq 767 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVLHCLDKTTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTAVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGTIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNREKSLFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRSRFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtccaatctgagcaaaggcggcaccaaaaaggacaccaagatgagaatacgagccttt
cctatgacgatggacgagaagtatgtcaacaacatctgggaccttctgaagaatgccatc
caggagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaacgcc
tacaccatggtgctgcacaaacacggcgagaagctttacacaggcctccgggaggtggtc
accgagcacctcatcaacaaagtacgggaagatgtcctcaactcactaaacaacaacttc
ctccaaacactgaaccaggcctggaacgaccaccagacggcaatggtcatgatcagagac
atcctcatgtacatggaccgggtgtacgtgcagcagaacaacgtggagaatgtctacaac
ctgggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctc
cgacagaccctcctggacatgatcgcacgagagaggaagggcgaggtggtggacaggggg
gcgatcagaaatgcctgccagatgttaatgatcttaggactcgaagggaggtcggtttac
gaagaggactttgaggccccgtttttagaaatgtctgcagagttcttccagatggaaagt
caaaagtttttggcagagaacagcgcgagcgtgtacataaagaaagtggaggcgcggata
aacgaggagatcgagcgcgtgctgcactgcctggacaagacgacggaagagcccatcgtc
aaggtggtggagagggagctcatctccaagcacatgaagaccatcgtggaaatggagaac
tcgggcctcgtccacatgctcaagaacggaaagacagaggacctggcgtgtatgtataag
ctctttagcagagtgccaaacggactgaagacaatgtgtgagtgcatgagctcctacctc
cgcgagcagggcaaggcgctggtgtcagaggagggcgagggcaaaaaccctgtagattac
atccagggtctgttggatctgaagtcacgtttcgaccgcttcctccaagagtcgttcaac
aatgaccggctcttcaagcagaccatcgcaggggactttgaatacttcctcaacctcaac
tcgcgctcccccgagtacctctccttgttcattgacgacaagctgaagaaaggcgtaaaa
ggattgacggagcaagaggtggagtcgatcctggacaaggccatggtgctcttcaggttc
atgcaggagaaggatgtgtttgagcggtactacaaacagcacctggccaggaggctgctc
accaacaagagcgtctcggacgactcggagaagaacatgatctctaagctcaagacggag
tgtggttgccagttcacctctaaactggaaggcatgttccgggacatgagcatctcaaac
acaaccatggacgagttccgccaacacctacagtcaacggcggtgtcgttgggcggagtt
gatctcacagtgagggtcttgacgacgggttactggccaacgcagtccgccacacccaaa
tgtaatatccccccttctcctcgacatgcatttgaagtctttagaaggttttatctggcc
aagcacagcggcaggcagcttacgttgcagcatcacatgggctctgcagacctcaacgcc
accttctacggcacaatcaaaaaggaggacggctcagaggtgggggtgggcggcgcccag
gtaacaggctccaacaccaggaagcacatactgcaggtgtccaccttccagatgacaata
ctaatgctcttcaacaaccgggagaagtctttgtttgaggagatccagcaggagacagac
atcccggagagggagctggtgcgtgcgctgcagtcactggcctgcgggaagcccacccaa
cgcgtcctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgttcaccgtt
aatgaccagttcacctccaagctgcaccgcgtcaagatccagacagtcgctgctaagcaa
ggagagtcggacccggagaggaaggagacgcggcagaaagtggacgacgacaggaagcac
gagattgaggcggccatcgtccgcatcatgaagtctagaaagaagatgcagcataacgta
ctagtagcagaggtcacccagcagctgcgatcgcgattcctccccagtcctgtagtcatc
aagaagcgcattgaaggactcattgagcgggaatatttggcgcggacaccagaggatcgc
aaagtgtacacttatgtagcataa

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