Salvelinus namaycush (lake trout): 120018441
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Entry
120018441 CDS
T07522
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120018441 (rnf169)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120018441 (rnf169)
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120018441 (rnf169)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120018441 (rnf169)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
120018441 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_10
zf-RING_5
LAG1-DNAbind
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
120018441
NCBI-ProteinID:
XP_038817573
UniProt:
A0A8U0P2R6
LinkDB
All DBs
Position
Sna23:42032485..42044691
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AA seq
658 aa
AA seq
DB search
MAATGSVRSTSGLGHKCKARPADMLKTRTHSQLLTLEEARCPVCSEILLEPVTMPCSHSV
CLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNIELWEMVRQSYPQRCEMRMEQR
DCETGGEDIFRSPAQVSKSGEIRLEYGKQKVKVPINEEKEEGRRKVHHREGCGTLKHFQD
PFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLHTNVVQRSQSCTDPEEGRRKMRVST
HLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQE
RSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLERPTSY
EASPTILQKWKQIEVDRQSVKVTSKGTLTNPMNEDLVFKPSPIEEKDGKPCSCAPAANKG
KEHLVMCAKTDSSGQENEKTCVHNKRRLIFDQAIGETAFHQKQFTKFHTPFVALTSEETV
RECGVSFESVVVPESHCGPTSIHQNPTLVPHDINAGVRSCKLKSKDSQDQRKEFDNRNCA
QNQPTSRRGKKRSQKTKHLEETESGLKRPRSQSQDGFNIECAQAELYIQQVQQEREDREL
ALNLQRQFDREQQQEDKQKTSPDKYFLRSCMSSENRIKCNPRRSGRISKKNEHFNCYY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagggtccgtcagatccaccagtggattggggcacaaatgcaaagccagg
cccgccgatatgctgaaaactcggacacattcacagctgctgaccttggaggaggcaagg
tgtccggtttgttcggaaattttattagagcccgtaactatgccatgtagccactcggtg
tgtctgcactgtttcaagcggacagttgaattcaccagtctgtgctgtcccctctgccgg
ctgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaacatcgaa
ctctgggaaatggttcgacagagttacccacaacgatgcgagatgagaatggagcagagg
gactgtgagactggtggagaagacattttccgctcgcctgctcaggtatccaaatctgga
gagatccgactggagtatggaaagcaaaaagtgaaggtaccaatcaatgaagagaaagaa
gaggggaggaggaaagtccaccacagagagggatgtggaactctcaagcactttcaagat
cctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaaccaga
aatgtgtctgcgtttgttagaagaacaaagatctcagctggtctacataccaatgtggtg
cagagaagccagagctgtactgatccagaagagggaagacgaaaaatgagggtatctact
catcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatccttctg
tcctctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcatagc
tggcgaggcgtcatcatggcgtcatcaacaccttttatggtcccccagtcgaaacaggag
aggtccattagccctgagagcaatgacagtatttctgaggagctgaatcacttcaagcca
atagtgtgttcgccgtgcaccccaccaaagcgactacccgacgggcgagtgatggaaccc
acaattgtgaagtccaccccccggaacttattccgcagcctggagaggcccaccagctac
gaagcgagccctactatcctccagaaatggaagcagatagaggtggaccgtcagtctgtc
aaagtgacctcgaagggcaccttgaccaaccccatgaacgaggaccttgtcttcaaacca
agccccatagaggagaaggacggcaagccctgtagctgcgctccagcagcaaataaggga
aaagaacacttggttatgtgtgccaagactgattcctctgggcaagagaatgaaaaaact
tgtgtacataataaacgaagactgatatttgatcaggccattggagagacagccttccat
caaaaacaattcacaaagtttcatactccatttgtagccttaaccagtgaggagactgtt
cgagaatgtggggtttcttttgagtctgtggtggtacctgaatcacattgtggaccaact
tcaattcatcaaaatccaaccttagtaccacacgatataaatgccggtgttaggagttgc
aaacttaaatcaaaggactcacaggatcagagaaaagagtttgataatagaaactgtgcc
cagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctggaa
gagacagagtctggactcaagaggccaagatcccagagccaagatggtttcaatatagaa
tgtgcgcaggctgaactgtacattcaacaggtacagcaagagagagaggacagagagcta
gcgttgaatcttcaaagacagtttgacagagaacagcaacaagaagacaagcaaaagacc
agtcctgacaagtactttctccggtcttgcatgtccagtgaaaacagaatcaaatgcaat
ccacgcagatcaggaagaatttccaaaaagaatgagcactttaattgctattattaa
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