Salvelinus namaycush (lake trout): 120018453
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Entry
120018453 CDS
T07522
Name
(RefSeq) eukaryotic translation initiation factor 2A-like
KO
K15026
translation initiation factor 2A
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120018453
03012 Translation factors [BR:
snh03012
]
120018453
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120018453
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
eIF-2A
120018453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
SR-25
Motif
Other DBs
NCBI-GeneID:
120018453
NCBI-ProteinID:
XP_038817593
UniProt:
A0A8U0TJ80
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Position
Sna23:complement(42841805..42849083)
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AA seq
581 aa
AA seq
DB search
MAPPIPILAVRGSDGTVLLRGPPNCEKNADFQRDPRQSRYVAFSKDGTLFAWCNGEKVTV
VKVADGSQVRLFDLPKTAMLEFSPLNTVLATWQVYSKTQDNPQGDANLQLWDLKTGTCLK
ALYQKKVQGWCPSWSDDEKIAVRSVNNELHFFENNDFITIANKLHLQKVSEFMLSPGSQP
SKVAVYVPGTKGAPSFVRLYQYPNFGGPTSALANKSFFKADRVTMLWNKKATAVLVQASI
EVDKTGASYYGEQTLHYLATNGETSAVQLQKNGPIYDVAWSPSSTEFCVVYGFMPAKATV
YNLKCDPVFDFGTGPRNAVYYSPQGHILVLAGFGNLRGQMEVWDVKKWKQVSKPQAPDST
HFAWCPDGEHVVTSTCAPRLRVSNGYKIWHYTGTVLYKQDTPTGTELWETVWQPFPDGTF
PERPVKYQAAPSELGSTEAKPAQAYRPPALRNKPVTASSKLHEEEPPQNMRPGATGDKQL
SKTALKNQKKREAKKAAKQEINPDALEPQSDPSPASSAQPETSCGDPETDKKIKNVKKKL
KAIDELKALQATGKPIQKNQLEKMEKEAQLMKELEDLQLKV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccatacctattttagcagtccggggatctgacgggacagtgctgctccgt
ggaccaccaaactgcgaaaagaatgcagattttcaaagggaccctcggcaaagtagatat
gtggctttcagcaaggacgggacattgtttgcgtggtgcaatggagagaaggtcactgtt
gtgaaggttgcagatggctctcaagtcaggttgtttgaccttccaaagactgcaatgttg
gagttctctccgctgaacactgtgctggctacatggcaggtgtatagcaagacacaggac
aacccacagggagatgccaacttgcagctgtgggatttgaaaactgggacctgcctcaag
gctctctaccagaagaaggtacagggatggtgtccaagttggtcagatgacgagaagatt
gctgtcaggagtgttaacaatgaacttcacttttttgagaacaacgattttatcaccatt
gccaataagcttcacttgcagaaggtgtctgagtttatgctgtcccctggaagtcagcct
agtaaggtggctgtttatgtccctgggaccaaaggtgccccctcgtttgtccggctatac
caataccccaactttggtggcccgacctctgctctggccaacaagagtttctttaaggcc
gacagggtgaccatgctatggaacaaaaaagccactgcggttctggtgcaggccagcata
gaggtggataaaacaggagcctcatactacggagaacaaactttacactacttggccacc
aatggggagacttctgcggtgcagctacagaagaacgggcccatctacgatgtggcatgg
agcccaagctccacagagttctgcgtggtctatggcttcatgcccgccaaggctactgtc
tacaacctcaagtgcgatcctgtcttcgacttcggcacgggcccccgcaatgccgtctac
tacagcccccagggccacatcctggtcttggccggcttcgggaacctgcggggccagatg
gaggtgtgggatgtcaagaagtggaagcaggtgtccaagccccaggcgcccgactccacc
cacttcgcctggtgcccggatggtgaacacgtcgtcacgtcgacctgtgccccccggcta
cgtgtcagcaacggctacaagatctggcactacaccggcacggttctgtacaagcaggac
acgccgacgggaacagagctctgggagactgtgtggcagcccttcccagacgggacgttc
cctgagaggccggtgaagtaccaggcagcacccagcgagctgggcagcacagaggccaag
ccggcccaggcctaccgcccacctgccctgcggaataaaccggtcacagccagctccaaa
ctgcatgaagaggagcctccacagaacatgaggcctggcgccaccggggacaagcagctg
tcaaagacggctctgaagaaccagaaaaaacgagaggcaaagaaagcagccaaacaggag
ataaacccagatgcccttgagcctcagtcagacccatctccagccagcagtgctcagcct
gaaacctcttgtggcgacccagagacggacaagaagatcaagaacgttaaaaagaaactg
aaagctatcgacgagctgaaagcgctgcaagcaactgggaaacccattcaaaagaaccag
ctggaaaagatggaaaaggaggctcaactcatgaaagagcttgaggatcttcaactaaaa
gtgtaa
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