Salvelinus namaycush (lake trout): 120018460
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Entry
120018460 CDS
T07522
Name
(RefSeq) ATP-binding cassette sub-family F member 3-like isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
snh03012
]
120018460
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120018460
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
nSTAND_NTPase5
AAA
MMR_HSR1
NACHT
AAA_15
AAA_16
AAA_28
ATP-synt_ab
DUF1672
ORC-CDC6-like
AAA_23
DUF7658
DUF87
TXNDC16_3rd
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
120018460
NCBI-ProteinID:
XP_038817607
UniProt:
A0A8U0P3J7
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Position
Sna23:43262887..43287329
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AA seq
719 aa
AA seq
DB search
MATYVDILKSEFPEIDTEVFEYITGVLDCGGVEFEDGEEVYDAIGGLLQGSSSDCKNEDD
IRDICQQMFNTLKLSNGHAASKQVLLDAPVRLSQISAECGSSQPCSYAILLSTSSTLSSS
THTPPQTVDARKLEKAEAKLKQKQGRRNERDSQKTTNPLVLEEASASQASSKKDSRVDLS
GKNRSYDIRIENFDVSFGERSLLQGAELSLSTGRRYGLIGRNGLGKTTLLKMLASRSLRV
PAHITILHVEQEVAGDETGALQSVLESDTVREGLLTEERLLNARIANGTAEGMETIRLSE
IYAKLEEIEADKAPARASIILCGLGFSPKMQTQTTKEFSGGWRMRLALARALFAKPDLLL
LDEPTNMLDVRAILWLENYLQTWQTTILVVSHDRNFLNAVVTDIVHLHSQRLESYRGDYE
NFVKTKEDRLKNQQREYEAQFQYREHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPL
EKETEVTLKFPDNFEKLSPPVLQLDEVEFYYNTDQRLFTQLSVSADLESRICIVGENGAG
KSTMLKLLMGELTPVNGIRHAHRNLKIGYFSQHHVDQLDLNVCSIELLLNKFPGRNEEEY
RHQLGGYGITGELATRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALA
KALNKFKGGVVLVSHDERLIRMVCRELWVCEHGNVRRVEGGFDEYRDILQEQFRKEGYL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatacgtggatattctgaagagcgagtttcccgaaattgacaccgaagtgttc
gaatatatcacgggtgtgttggactgtggaggggtggagtttgaggatggagaggaggtg
tatgatgcgattggagggctgttgcaggggtcgtcgtctgactgtaaaaacgaggatgac
attcgggacatctgtcagcagatgttcaacactcttaaactgagtaacggccatgccgct
tcaaagcaggtgctgctcgacgctccggtgcggttgtctcagatatctgcagagtgtggc
tcgagtcagccctgtagctatgctattctcctgtcaacttcatccactttgtcttcttcc
acacacacaccacctcagactgtggatgcgaggaagctagagaaggccgaagccaagctg
aagcaaaaacaagggaggagaaatgaacgtgattcgcaaaaaacaactaatccactggta
ctggaggaggcatcagccagccaggccagtagcaagaaagacagtcgcgtcgacttgtcc
gggaagaatcgcagctacgatatccgcatcgagaactttgatgtgtcgtttggcgagagg
tctttgctgcagggggcggagctgtctctgtcaacaggtcgccgctacggcctgattggc
cgcaacggcctggggaagaccacgctgctaaaaatgctggcgagccgcagcctgcgtgtc
cctgcccacatcacaatcctgcacgtggagcaggaggtcgctggagacgaaacaggggcg
cttcagagcgtgctggagagcgacacggtccgggaggggctcctgacagaggaacgcctg
ctcaatgcgcgcatagccaacggaacagctgaaggaatggagactattcgactgtcggag
atctatgctaaactggaggagattgaagcagacaaggcacctgcccgagcttcaatcatc
ctatgtggtttaggtttttctcctaaaatgcaaacgcagacaaccaaggagttttctgga
ggttggcggatgagattagctctggctagagctctctttgccaagcctgatcttttgtta
cttgatgagcccaccaacatgttggatgtccgagccattctttggctggagaattacctg
cagacctggcagaccaccatcctggtggtgtcccacgaccggaacttcctcaacgccgtg
gtgactgacatcgtccacctgcactcgcagcggctggagagttaccgcggcgactacgag
aactttgtcaagaccaaagaggaccgcctgaagaaccagcagagggagtacgaggcccag
tttcagtacagagagcacatccaggtgttcatcgaccggttcagatacaacgccaacaga
gcggcacaggtgcagagcaaactgaagctcttagaaaaactgcctgaactcaaacccctg
gagaaggaaaccgaagtcaccttaaagttccctgataactttgagaagctgtctcccccg
gtgctccagttggatgaggtggagttctactataacactgaccagcgcctcttcacacag
ctgtctgtgtctgcagacctggagtctcgcatctgcatcgtgggtgagaacggggcgggt
aaatccaccatgctcaagctactgatgggagagttaacgcctgtcaatggcatcagacac
gcccatcggaacctgaagatcggttatttcagtcaacaccacgtggatcaactggacctc
aacgtgtgttcaattgagctgttactcaacaaattcccaggtcgtaacgaggaggagtac
aggcaccaactgggtggttatgggataaccggtgagctggcaactcggccggtggccagt
ctgtcaggagggcagaagagccgggtggccttcgctcagatgaccatgccttgcccaaac
ttctatatccttgacgagccgaccaatcacctggacatggaaacgatcgaggctctagcg
aaggcgctcaacaaattcaaaggtggggtggtccttgtttctcacgacgagcgtctgatc
cggatggtgtgcagagagctgtgggtctgtgagcacgggaacgtgcggcgagtggagggg
ggctttgacgagtaccgggatatcttgcaggaacagttccgcaaggagggctacctgtga
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