Salvelinus namaycush (lake trout): 120018461
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Entry
120018461 CDS
T07522
Name
(RefSeq) beta-1,3-glucosyltransferase-like isoform X1
KO
K13675
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120018461
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120018461
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120018461
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Gene cluster
GFIT
Motif
Pfam:
Fringe
DUF604
Anth_synt_I_N
Motif
Other DBs
NCBI-GeneID:
120018461
NCBI-ProteinID:
XP_038817609
UniProt:
A0A8U0P5A6
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Position
Sna23:43408271..43557220
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AA seq
505 aa
AA seq
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MIPENPDVVHTVAFYLLFLSFVPAIIATSSSRQGSQNQDAKAVLYDSQPDLREIVFVIQS
QSNSFHVSRAERQRADLLQQTQSLTQTPPPVLLLHSLTDNEGDWSILPVLPYLSLLFGKN
SSWLVFLEEETNVKVTKLLQALRKFDRRKEWFLGKPLHDEESTIIHHYAFAENPSIFKYP
DFSAAWALSIPLLDRLANKVRDDPLKSDFTIDLKHEYLPMLLQVALYIWENGQGPRLTAV
PELCTEPEHSPTAQHCATTLSSPAPLCGEPVKKEDIFVAVKTCKKFHTERVPVVKKTWER
EASLLEYYSDHTDPSIPTIDLGVPNTERGHCGKTFAILERYVGDAVPKTRWLLVVDDDTL
ISLPRLQMLLSCYDPSEPVCLGERYGYGLGQGGYSYITGGGGMVFSRTAVVRLLASDCKC
YSNDAPDDMVLGMCLNALGLPVTHSSLFHQARPEDYSRDFLAHQVPISFHKHWNIDPIAV
FNRWLKDELGSTSPHGLNKSTKEEL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgaaaacccagatgtcgtacacaccgttgctttttatttactttttctgtcg
ttcgttcctgccatcattgccaccagcagctcaagacaaggctcccagaaccaagatgca
aaggcagtcctctatgacagccaacctgacctgcgagagatagtgtttgtgatccagagc
cagagtaactcattccacgtgagtcgggcggagagacagagagcagacctgttacaacag
actcagagcctcacacagacaccacctccggtcctgctcctccacagtctgacagacaat
gagggagactggagcatccttcctgtgctgccttacttatccttgttgtttgggaagaac
tcatcctggttggtgtttctggaagaggagactaacgtcaaggtgaccaaactgctccag
gccctcaggaagtttgacaggagaaaagagtggttcctgggtaaacctcttcatgatgag
gagtcgaccatcatccaccactacgcctttgcagagaacccctccatctttaaataccca
gacttctctgctgcctgggcccttagcatccccctgcttgacaggctcgcaaacaaagtg
agagatgacccactcaagtctgacttcactatcgatctgaagcatgagtatcttcccatg
ttgttgcaggtagctctgtatatctgggagaatggccaagggcctcgtctgacggcagtc
ccagagctgtgtactgagccagaacactctcccactgcccaacactgtgctaccaccctc
agcagtcctgctcccctgtgtggggagcctgtaaagaaggaagacatctttgtcgctgtg
aaaacttgtaagaagtttcacactgagagggtcccagtggtgaagaagacgtgggagaga
gaggcatctctgttggagtattacagtgatcacactgacccttccatacctaccatcgac
ctaggagtccccaacacagagagaggtcattgtgggaagacatttgccatcttggagagg
tatgtcggggacgcagtgccaaagacgagatggcttctggtggtggatgatgacacactc
atcagcctgcccagactgcagatgctgctgagctgttacgacccctctgaaccggtgtgt
ctcggggagaggtacggctacggactgggccagggaggctacagctacatcaccggagga
ggggggatggtgttcagtaggaccgcggtggtgaggctcctggccagtgactgcaagtgt
tacagtaatgacgcccctgatgacatggtgctggggatgtgtctcaacgctctggggctc
cctgtcacacatagctccctcttccaccaggctcgacctgaagactactccagagacttc
ctagcccaccaggtgcccatctccttccacaaacactggaacatcgaccccatcgcagtc
ttcaacaggtggctaaaggacgagttggggtcaacaagcccacacggactaaacaagagc
accaaggaagagttatag
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