Salvelinus namaycush (lake trout): 120018465
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Entry
120018465 CDS
T07522
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120018465 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120018465 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120018465 (zgc:162872)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120018465 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120018465 (zgc:162872)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120018465 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
SOS1_NGEF_PH
PH_8
Motif
Other DBs
NCBI-GeneID:
120018465
NCBI-ProteinID:
XP_038817614
UniProt:
A0A8U0TI42
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Position
23:43923340..43940947
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AA seq
719 aa
AA seq
DB search
MDSFLDYEECIQDSPAFRLTLDKCQTDVAELQSRVEKVMKLCGKMVESGQAYNTANQHFL
AGLAEFSTYHKRDSVIMNCMSQFIQGLQEMINFHTVLFDQTQRAITQQLSNLLTQFIPQL
GETRKEFVRIGEDLETAAVKNAQIYRHKVTDAERASHLLLATRKCHQHFALDYCLQLNNF
KAQQKLDILNSVFSYFHAQYTFFHQGFDLLRDLEPTMKSMAAQLAQLSTECTAKRKDLEN
THLLIQQRDASGEPILRSCPDGGETIQGYLFKRSRRKNKTWKRCWFSIKDNQLVYTKSHK
EEPVSLFDDLRLCAVKSLDSIDRRFSFELVSVKKCCALQADSEELKQAWISAVLGSIDMA
YRERVESQQPQPKEIPLPLQSPSDPQPGQPPQRPAALVVALQSPGNHRCCDCSEEEPRWA
SVNLGITVCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCGLGNDVINGIYESRCAA
EGRVKPSPGSPRPEKETWIKEKYVEKRFVKDASSPETQIGRENAGRQLYRAAFQGDLVTM
ASALAQGAEVNWSQAEEEGRTALIGSTFGGSLSACEFLLQNGANVNYRDQRGQGALHTAA
TWGHTGQVCLLLKKGANQYAVDERGQDPLAIAIETAHADIVTLLRMARMNEEMRDSEGFF
GSMGDDETFQDIFRDFSDMASHDPERLTRRQFSRSGQEEGQDKRMVNYQHKAEKEEEDT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcttggactatgaagaatgcatccaggactcacctgcatttaggcttacc
ctggataagtgtcaaactgatgttgcagagctgcagagtcgagtggaaaaggtgatgaag
ctctgtggcaagatggttgaatcagggcaagcatacaacacagcaaatcagcatttcctc
gccggactggctgagttctccacgtatcacaaacgtgacagcgtcatcatgaactgcatg
agtcagttcattcaaggactacaggagatgatcaactttcatactgtgctgtttgaccag
acgcagagagctatcactcagcagctgtcaaaccttctcacacagttcataccccagcta
ggagagactaggaaggagtttgtgcggattggggaggatctggagacagcggcggtgaaa
aatgcccagatataccgccacaaagtcaccgatgcagagcgtgccagccatctgctgttg
gccacacgcaaatgtcaccagcactttgcccttgattactgcttgcagctgaataacttc
aaggcccagcagaagctggacatcctaaattctgtgttctcctacttccatgcccagtat
accttcttccaccaaggctttgacttgctgagagacttggagcccactatgaagtccatg
gccgcacagcttgctcaactctcgactgaatgtacagctaaaagaaaggacctggagaat
acccacctactgatccagcagagagatgcctcaggggagcccatactacgttcctgtcct
gatggtggggaaaccatacagggctacctcttcaaaagatctcggagaaagaacaagaca
tggaagagatgctggttctccattaaagacaaccaattggtgtacacaaagtcacacaag
gaggagcctgtgtcgctgtttgatgacctcaggctgtgtgcggtgaagtctctggacagc
attgaccgccgcttcagttttgagctggtttctgttaaaaaatgctgtgcccttcaggct
gactcagaggagctgaagcaggcttggatcagtgccgttctagggagcatagacatggcc
taccgcgagagagtggagtcccagcagcctcagcccaaagaaatccctctgcccctccag
agcccctcagacccccagccaggacagcctcctcaaaggcctgcggctttggttgtggcc
ctccaaagtccggggaaccaccgctgctgcgactgcagtgaggaggagccacgctgggcc
agcgtcaacctgggtatcaccgtgtgcatcgagtgctccggcatccacaggagccttggg
gtccatctctccaaagtgcgatctctcaccctagactcctgggatcccgaacagctgaag
ctgctgtgtggtctgggtaatgatgtcatcaatgggatatatgagtccaggtgtgcagca
gagggcagagtaaagcctagtcctggcagccctcgcccagagaaagagacatggattaaa
gagaaatatgtggagaaaagatttgtgaaggatgccagctcgcctgaaacacagattggg
agggagaatgcaggacgccagttgtaccgggctgctttccaaggggacctggtcaccatg
gcatcagcgttggcgcagggtgcagaggtgaactggagccaagctgaggaggagggacgc
actgctctcattggctcaacttttgggggctccctgtcggcctgtgagttcctactgcag
aatggagccaatgtaaactaccgtgaccagcgcggtcaaggtgcccttcacactgcagcc
acctggggccacacagggcaagtgtgtctacttctaaaaaagggagccaatcagtatgca
gttgacgagagggggcaggacccactcgccattgccatagagacagcacatgccgatatt
gtaaccctactacgaatggctcgcatgaatgaagagatgagagactccgagggattcttt
ggatctatgggtgacgatgagacatttcaagacatcttccgtgacttcagtgatatggct
tctcacgatccagaaagactcacccgtcgacagttcagcagaagcggacaagaggaggga
caggacaagaggatggtgaattaccagcacaaggcagagaaggaggaggaagacacatag
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