Salvelinus namaycush (lake trout): 120018577
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Entry
120018577 CDS
T07522
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120018577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120018577
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120018577
BRITE hierarchy
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GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
120018577
NCBI-ProteinID:
XP_038817718
UniProt:
A0A8U0P4B6
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Position
Sna23:26252313..26266981
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AA seq
1336 aa
AA seq
DB search
MAASAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDMSMECKTSILKYLCEIQF
DDNMKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETEKEMDREKGGSNCATPVERGRRGKEEGEAE
GEEEEEARQMRKAEEDKKKSKEREKNEEDEEKREKSRSSSYPESTSTDVNMASLAEKENP
TKLEPVVSVKEENIAVEMKEEKEKKEEGEKQSGRKEERSEVIDNRVSTITALVKEEPQTL
SNSPSNAVSVVMVPISATMKQEVPPMKEEAERALRTDQQAKIPLKKRELFGANRHHSNTH
HNNNNDMHSNHHNNNSHSSSTSSSIIVRNPSVTHTKEEQLGRQSTPDGGLAVPLPEELTN
GGAPLNGLGGLIGGIGHVGVICRPVSQQQDGGSVCTERTRPGSEEGEERARAPDKERSRQ
SVLVRKSPGWGETGSPSPLEPRGQERQAGGEEREGERERNEQGERSRERLGEDGREKARE
NLHGDQSGERDDNPKEKKTNLHVEKSEGCHGTEEEEKKKKSTSGEKEQESDSSQTVEGQK
VQEDQEEALNTDTPAHAGVKGAGHGATDRPGPLEASSELQKEGIRLKIKIPPNQRRENVR
EQKGEEQGDGRSLRRSARICRPSPNKVERQDAPPGVREEEEEKTAQLQKKRENPEGQSRT
VKSRRRQRGPRWSNTRAKRCKPNEGGAEERGREEGRGGGGSGCESDDSSQSEETPNEDPC
SHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGEWFCPPCQHKLLCDRLEEQLQNL
DCAMKKRDRAERRRERLVYVGISVENIIPQEGEEEEEKQAKKKDAKNTKNLGRRSTRTRK
CISYRFDDFDDAIDEAIEEDVRDADGGGVGRDKDMATISEEGNEKRGPTTAQAPPTRSRK
RRRLNDLESDSTAAESEEEFQLSASTEEEFVASGDEEAASDVDSFASDPGFVSQSTRAQR
RGPKQRTTRTSAKCKKCPRRRRRGWGEEESEDEEEEEIETSDLSDSDEDRKRCGLRRGRK
REVNYRETSESEGSQATTNKDKAKSVRRLSSSNSDESSHSRESEEEEKRGKRWREEVEET
RTRGKKRGGEKMGRGKRREVLIEQRRKHLALLKKCIPSTKDDEDDNGESESSSEEDRPIR
KRLNRIDSDEEGKNKEDEEEKKLRKTLSKDKESNSPNRQQASRGSMKPGAESAALPRDRA
ARAGQNSPPPPDQSDA
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcagcggcagcgcagggctcaaaccccggtctctgccccagtttcgctgtg
gtctgctcgttcctggagcgctacggacaagccttggacctacccgaactcacctttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccactagtggagctgcac
gtcaagctgctgaggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgccaggacatcaacagtagctgggcctgggagctggaacacaagggctac
caggacatgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacatgaagttcaagacgttggtgaacgaggaggaggcggaggcgatgaggctg
cagccgttgggcagagacagacagggcctgatgtactggctgcagactgacgcccaacac
aacatccgactgtacacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaatgacttagccgatgctttggacctcctgaagacccagctggatcca
gaacacaaggagaaagaggaaggagagacggagaaagagatggacagagagaagggaggg
tccaactgtgccacacctgtggagagggggagaagaggcaaggaggagggcgaagctgaa
ggagaggaagaggaggaggcaagacagatgaggaaggctgaggaagacaagaagaagagt
aaagagagagagaagaacgaggaagatgaggaaaagcgagagaagagtagatcatcttcc
tacccagagtccactagtacggacgtcaacatggcatctttagcagagaaggaaaaccca
accaagcttgaaccggtagtctcagtgaaggaggaaaacattgcagttgagatgaaggaa
gaaaaggagaagaaagaagagggagagaaacagagcggtaggaaggaggagaggtcagaa
gtgattgacaacagagtgagcaccatcactgcactggtcaaagaggaaccccaaacgctt
agcaactcccctagcaatgctgtctccgtcgtcatggtgcccatctcggcaacgatgaaa
caggaagttcctcctatgaaggaggaagcagagagggcgctgaggaccgatcagcaggcc
aagataccactgaagaagagagagctctttggcgccaaccgtcaccatagcaacacacat
cacaacaacaacaatgacatgcacagcaaccatcacaacaacaacagccatagcagcagt
actagcagtagcatcatcgtccgtaacccttcagtaacacataccaaggaggagcagctg
gggaggcagtcaactcctgatgggggcctggcagtcccattgccagaggagctgaccaat
gggggggctcccctaaacgggcttggagggctcatagggggtataggtcatgtgggggtc
atctgcaggccggtgtcgcagcaacaagatggcggatcggtctgtacggagagaaccaga
ccagggtcagaggagggggaggagagggccagagctccagacaaggagaggagcaggcag
tcagtcctggtgaggaagagtcctggctggggagagactggatccccatcacccctggag
cctagaggacaggagagacaggcaggaggagaggagagggaaggagagagagagaggaac
gagcaaggagagagatcaagggagaggttaggagaggatggaagagagaaagcgagggag
aatttacatggagaccagtctggagagagggatgacaacccaaaagagaaaaagactaac
ctccatgtggagaaaagtgagggatgccatggaacagaggaagaggagaagaagaagaag
agtacctcaggagagaaggagcaggagtcagatagcagccagactgtagaaggacagaag
gttcaggaggaccaggaagaggccctcaacacagacacaccagcccatgccggggtgaaa
ggtgctgggcatggagcaacagaccggccgggtcccctggaagcctcctctgagctacag
aaagaagggatcaggctgaagataaagatccctcccaaccagaggagagagaacgtgaga
gagcagaagggggaggagcagggagatgggaggtctctgcggagatcggctcggatctgc
agacccagcccaaacaaggtggagaggcaagacgcacccccaggggtgagggaggaagaa
gaggagaagactgctcaattgcaaaagaagagagaaaaccctgagggacaaagcaggact
gtgaagagcagacgaagacaacgaggcccccgctggtcaaatactcgagcgaagagatgc
aaaccgaatgagggaggagcggaggagagagggagggaggaggggagagggggtggggga
agtggttgtgaatcagatgactctagccaatcagaggagacgcctaatgaagatccctgc
agccactgtggactccccaaccaccccgaactgatcctgctgtgtgattcatgtgatagt
ggttaccacaccgcctgtctcagaccccctctcatggtcatacctgagggagaatggttc
tgcccgccctgccaacacaagctgctgtgtgacagactagaggagcagctgcagaatttg
gattgcgctatgaagaaaagagacagagctgagaggaggagggagcgtctggtgtatgtg
ggaatcagtgtggagaacatcattcctcaggaaggggaggaagaagaggagaaacaggcg
aaaaagaaagatgcaaaaaataccaaaaatctgggaaggaggtctaccagaaccaggaag
tgtatcagctacaggtttgatgactttgatgacgccattgatgaagcgatagaggaagac
gtcagagatgctgatggaggaggagtggggcgggataaggacatggccaccatatcggag
gaggggaacgagaaacgaggaccaaccacagctcaggcccctcccaccaggagcaggaag
aggcggagacttaacgacctggagagcgacagcacggctgcagagagtgaggaggagttt
cagctcagcgccagtacggaggaggagtttgtagcgtcaggtgatgaggaagcagccagt
gatgtggacagctttgccagtgacccgggcttcgtaagccagtctacacgggcacagaga
cggggacctaaacagagaaccaccaggacttcagcaaagtgcaagaaatgccctcgcaga
cggaggagaggatggggggaggaggagagtgaagatgaggaggaagaggagatagagacc
agtgatttgagtgacagcgatgaggacaggaagaggtgtggtttaaggcggggccggaag
cgggaggtgaactaccgcgagacgtcggaatccgagggttcccaggcaaccactaataag
gacaaggccaaatccgtccgtcgtctctccagctcaaacagcgatgaatcctcccattcg
agagagtctgaggaggaagaaaagaggggaaagaggtggagagaagaggtggaggagact
agaacaaggggaaagaagaggggaggagagaagatgggcagagggaagcggcgagaggtg
ttgatagaacagcggaggaaacatctagctctgctgaagaaatgcataccctccactaaa
gatgatgaggatgataatggggaatcggagtcgtcatccgaggaagatcgtcctatccgc
aaacgacttaaccgcatcgactctgatgaagagggaaaaaataaggaggatgaagaggag
aagaagctgagaaagacgttgtcaaaagacaaggaatcaaacagccctaacagacagcag
gcctctagaggctcaatgaagcctggggctgagagtgcagccttacccagggacagagca
gccagagctggacagaacagccccccacctcctgaccagtcagacgcatga
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