Salvelinus namaycush (lake trout): 120018736
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Entry
120018736 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120018736
00071 Fatty acid degradation
120018736
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120018736
09143 Cell growth and death
04216 Ferroptosis
120018736
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120018736
03320 PPAR signaling pathway
120018736
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120018736
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120018736
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120018736
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120018736
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120018736
Exosomal proteins of breast cancer cells
120018736
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120018736
NCBI-ProteinID:
XP_038817867
UniProt:
A0A8U0P4M2
LinkDB
All DBs
Position
Sna23:14696133..14738325
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AA seq
717 aa
AA seq
DB search
MKLKEDLNPVLLLLFQVTVWLYSVLAFLPSYLFSSVSESDAGLGSEQERAQRLKAQSVTG
RPAGPYRAMGATKRLVSSLHPGVDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
VFKKVILGQYRWLSYAETHKAAARFGSGLAALGQRAHNNIAIFCETRAEWVIAAQACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKFILLEVPRLQHIIVVDDTPT
KWPGYPRGISVHNMATVQELGTKPENVSRGRKQPMPSDIAVIMYTSGSTGVPKGVMISHS
NIIAGITGMAERIPNLGENDTYIGYLPLAHVLELSAELVCVAHGCRIGYSSPQTLADQST
KIKKGSKGDTSVLQPTLMAAVPEIMDRIYKNVMTKVEEMSSAQRTLFTLAYNYKLEQLSQ
GRSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAATQRFMNVCFCCPVGQGYGLTETCG
AGTISEMWDYSTGRVGGPLVCSEIKLKDWVEGGYHSTDTPNPQGEILIGGPNVTMGYYKN
EAKNQDFFVDDNGQRWFCTGDIGEVHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKN
CPLIDNICAYANSEEMYVIGFVVPNQKHLLSLAEQYCIRGSWEELCNNAAMEGVVLQVIT
EAALSAQLERFEIPRKIRLSPDPWTPETGLVTDAFKLKRQQLKSKYQDDIERMYGGK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggatttgaacccagtgctgctgctgctcttccaggtgacggtgtgg
ctgtactctgtcctagccttcctcccctcctacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggagcgggctcagagactcaaggcccagtctgtgacgggt
cgccccgcggggccctacagggccatgggcgccaccaagaggctggtgtcgtccctgcac
cccggggtagacacactggataaggtgtttgaggatgcatccagaaggttccctgacaga
gactgcctgggcacaagagaggtggtcatggaggaggatgagagacagagcaacggaaag
gtcttcaagaaggtgatcctggggcagtaccgctggctgtcctatgccgagacccacaag
gcagcagcacgctttggcagtggtcttgcagcgttgggccagagggcccacaacaacatt
gccatcttctgtgagaccagggccgagtgggtcatagccgcacaggcgtgcttcatgcaa
aacttccccttggtcactctgtactctaccctggggggtccggccataactcacggtctg
aacgagacagaggttagtcacatcatcaccagcagagagctactggagaccagactcaag
ttcatcctgctggaggtgcccaggctgcagcacatcattgtggtggatgacacacccacc
aagtggcctggttacccacgaggcatcagtgtccacaacatggctaccgttcaggagctg
gggaccaagcctgagaatgtgtctcgtgggcgtaaacagcccatgccctctgacatcgct
gtcatcatgtacaccagtggctccactggcgtacccaagggcgtcatgatctcccatagc
aacatcattgctggcatcactggcatggcagaaaggatacccaacctgggtgagaatgac
acctacatcgggtacctccccctggcccatgtgttggagctgagtgcagagctggtgtgt
gtggctcacggctgcaggattggctactcctccccccagacgctagcggaccagtcaaca
aagattaaaaaaggcagtaaaggagacaccagtgttctgcagccgactctaatggcagct
gtgccggagattatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagc
agtgctcagaggactctgttcactctggcctacaactacaagctggagcagctctcccag
ggacgcagcacgccactgtgtgacaacctggtgtttaagaaggttcggtccctcctgggg
gggaagaccagggtgctgctgtcgggcggggcgcccctctctgccgccacccagcgcttc
atgaacgtgtgcttctgttgccccgtgggccagggctacggcctcaccgagacctgcgga
gctggaaccatcagtgagatgtgggactacagcacagggcgagttggaggaccgctcgtt
tgttctgaaatcaagctcaaggattgggtggagggtggctaccacagcacagacacgccc
aacccacaaggtgagatcctgattggtgggcccaacgttaccatgggttactacaagaat
gaggccaagaaccaggacttctttgtggacgacaacggccagcgctggttctgtacggga
gacataggagaggtccatcctgatggatgcctcaagatcattgatcgtaagaaggacctg
gttaagctccaggcaggagagtatgtgtctctggggaaggtggaggccatgctgaagaac
tgcccccttatagacaacatctgtgcctacgccaacagtgaagagatgtacgtgattggc
tttgtggtgcccaatcagaagcatctgctgtcgctagcggagcagtattgtatccggggc
tcgtgggaggagctgtgtaacaatgctgccatggagggggtggtcctgcaggtcatcact
gaggctgccctatcagcccagctggagcggtttgagatcccccgtaagatccgtctgagc
cccgacccctggacccccgagacgggcctagtgaccgacgccttcaagctcaaacgccag
cagctgaagagtaagtaccaggacgacatcgagagaatgtacggcgggaagtag
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