Salvelinus namaycush (lake trout): 120018825
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Entry
120018825 CDS
T07522
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120018825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120018825
Spliceosome [BR:
snh03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
120018825
Complex B
120018825
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
120018825
NCBI-ProteinID:
XP_038817968
UniProt:
A0A8U0TJK5
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All DBs
Position
23:complement(39386943..39389832)
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AA seq
281 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMPMPGQPPYMPPPGMMPPPGMGPGGM
LPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgcctcaaccacaccatatacatcaacaacctgaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgcaatcttctctcagtttggtcaaatc
ctggacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaagggggactctgacatcatcgctaaaatgaagggcacc
tacgtggagcgtgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaaaaagggtgtgccagggacccctgtagtacccatgggccctggagttccaaca
cccatgcccggaatgccacccatgagcggagctcctcgtatgatgccaatgccagggcag
cccccctacatgcccccgccaggcatgatgccacctccagggatgggccctggggggatg
ctccctggtgccatgcctccgggtgggatgatgcccgggcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgcctggtgcct
ggtcgccacgacattgcctttgtggagtttgataatgacgtgcaggctggagcggccagg
gaggcactacagggcttcaagatcactcagaccaacgccatgaagatctctttcgccaag
aaataa
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