Salvelinus namaycush (lake trout): 120018829
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Entry
120018829 CDS
T07522
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120018829
G protein-coupled receptors [BR:
snh04030
]
Others
Chemoreception
Vomeronasal pheromone
120018829
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
DUF2919
Motif
Other DBs
NCBI-GeneID:
120018829
NCBI-ProteinID:
XP_038817972
UniProt:
A0A8U0P4U4
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Position
Sna23:complement(3675083..3685082)
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AA seq
868 aa
AA seq
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MSLWGWLWLLYCLHVPGCVRGLYGGGEGACRLIAKPVSGTVYQAGDVVIGGLFPIHVEAP
LPEQEFRSIKGHSTCTIFYQRAYRWLQTMIFAVEEINRDPALLPNLTLGFLAADTCLSEG
TTLGAALAMVTGQEASVVGTDCGTTPEVPIIIGDARSSASIVVAQTLGPFDLPMVSYFAS
CACLSDTWRYPSFFRTVPSDAFQARGMAKLLRQLRWVWVGLVSGDDDYGKFGVQLLLQEL
QGSGVCVAYSEVIPKVASQRRIRYIVDTIKGSTARVVVTFAITKDAHALMEEVVRQNITD
KQWIASEAWVTDSTLSSPENLPSLAGTIGFALKKADIPGLGTFLTRLHPDGDYQKSDPFV
WELWEEMFVCSLGVDLSMTLSSRRQCTGSEVIGEGESQYADVSQLRASYNVYKAVYAIAY
AIQDMVACRPGDRMFNGGQCPDIRKLQPSQIVHYLRGVNFSTPVGESFHFDMNGDPPASY
DIINWHVTPGGKAEFVQVGHFLSSEGSDDQFHIDMDKVVWGGGSGDEVPVSVCSADCPPG
TRHAVQKGRPECCFDCLSCAEGEISNTTGSVECIRCPERFWSNPDRTACIPQLVDFLSYS
DTMGVILSVISVSGATLTAGALATFLYHRHTALVKANNSELSFLLLLSLKLCFLCALVFI
GQPKPWTCMLRHTLFGISFVFCISCLLSRTVVVLVAFRATLPGENLMRYFSPTQQRMGIS
LCTLIQVLICVLWLALAPPRPAERGDREGRGPRVVLECEVGSVVGFSLVLGYIGLLASLC
LLLAFLARKLPDNFNEAKLITFSMLIFCAVWISFIPAYVSSPGKYTVAVEIFAILASSFG
LLFCLFAPKCFIILLRPERNTKKHMMSK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctggggctggctgtggctgctctactgtctccatgtccctgggtgtgtccgg
ggtctgtatggaggtggagagggggcttgtcggctgatagctaagccagtatccggcact
gtttatcaggcaggagatgtggtcattgggggcctgttccccatccatgtggaagcccct
ctgccagagcaggagttcaggagcattaagggacattctacctgtacaattttctaccag
cgtgcctaccgttggctccagactatgatctttgctgtggaggagattaaccgtgaccca
gccctcctgcctaacctcaccctggggttcctggctgctgacacatgcctgtcagagggc
accaccctgggggcagccctagccatggtgactggccaggaggcctccgtggtgggcaca
gactgtggcacaacccctgaggttcccatcatcatcggggatgcccgctcctcagcttcc
atcgtggtggcacagaccctcgggccatttgatttacccatggtgagttactttgcctcc
tgtgcgtgtttgagtgacacctggaggtacccctcattcttccgtacggtacccagcgat
gccttccaggctcggggcatggccaagctgctgcgtcagctgagatgggtgtgggtggga
ctggtgtcaggggatgatgactatggcaagtttggggttcagctgcttctccaagagctc
cagggatctggggtgtgtgtcgcttactctgaggtcatccccaaggtagcgtctcagaga
cgtatcaggtacatcgtggacaccatcaaaggatctactgccagagtggtggtgacattt
gctatcacaaaggatgcacatgccctgatggaagaggttgtccgccagaacattacagat
aagcagtggattgcctcagaggcctgggtcactgactctactctctcctcccctgaaaac
ctgccctctcttgccgggaccattggatttgcactgaagaaagctgacattcccggcctg
gggactttcctaacacgcctccatccagacggggactaccagaagtccgaccccttcgtg
tgggaattgtgggaagagatgtttgtgtgttctctgggggttgacctcagcatgacgctg
tcgtccaggcgacagtgtactgggtcagaggtcataggtgagggggagagccagtatgct
gacgtgtctcagctgagagccagctataatgtgtacaaggctgtgtacgccatcgcctac
gccatacaggatatggtggcctgtcgaccaggggacagaatgtttaatggtggacagtgc
cctgatatcaggaagcttcagcccagccagattgttcattatctgaggggagtgaacttc
agtactcctgtgggggaatctttccacttcgacatgaatggtgatccgcctgcctcttat
gacatcatcaactggcatgtgacccccggggggaaggcagagtttgtccaggtaggacat
tttctgtcctctgagggatcggacgaccagttccacatcgacatggataaagtggtgtgg
ggtgggggcagcggagatgaggtccctgtgtctgtatgcagtgctgactgtccccctggt
accaggcatgcggtacagaaggggaggcctgagtgctgctttgactgtctgtcctgcgct
gagggagagatcagcaacacaacagggtcagttgagtgtattaggtgtccagagcggttc
tggtccaaccctgatcgtacggcctgcatcccccagctagtggacttcctctcctacagc
gacaccatgggcgtaatactgtctgtcatctcagtttctggggcaacactcacagccggt
gccctggccaccttcctctaccaccgacacacggccctggtgaaagccaataactctgag
ctcagcttcctgctcttgctgtctctcaagctctgcttcctgtgcgctctggttttcatt
ggccagccgaagccatggacgtgcatgctgagacacaccctgtttggtataagctttgtg
ttctgcatctcctgtctgctcagcaggactgtggtggtgctggtggccttcagggccact
ctgcctggagagaacctgatgagatacttcagccccacccagcagaggatgggtatctca
ctctgcacactcatccaggtgctgatctgtgtgctgtggctggccttagctccaccccga
cctgctgagaggggggacagagagggtcgggggccgagggtcgtcctggagtgtgaggtg
ggctctgtggttggcttctctctggtgcttggctacatcggcctgctggcctccctctgt
ctcctcttagccttcctggccaggaaactcccagacaacttcaacgaggccaagctcatc
accttcagcatgctgatcttctgtgccgtgtggatctccttcatccctgcctacgtcagc
tctcctgggaagtacacagtagctgtagagatctttgccatcctggcctccagctttggg
ctgctgttctgtctgtttgctccaaagtgtttcatcatccttctgagaccagagagaaac
accaagaaacacatgatgtccaaatag
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