KEGG   Salvelinus namaycush (lake trout): 120018845
Entry
120018845         CDS       T07522                                 
Name
(RefSeq) high mobility group-T protein-like
  KO
K10802  high mobility group protein B1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03410  Base excision repair
snh04140  Autophagy - animal
snh04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120018845
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120018845
  09143 Cell growth and death
   04217 Necroptosis
    120018845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120018845
   03400 DNA repair and recombination proteins [BR:snh03400]
    120018845
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120018845
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    120018845
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120018845
   MMR (mismatch excision repair)
    Other MMR factors
     120018845
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   120018845
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 120018845
NCBI-ProteinID: XP_038817991
UniProt: A0A8U0P2S6
LinkDB
Position
Sna23:complement(43338456..43341160)
AA seq 196 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDE
EEDDEEEDDDDEDDDE
NT seq 591 nt   +upstreamnt  +downstreamnt
atggggaaagatcctaggaaaccgagaggcaagatgtcgtcatatgcttacttcgtgcag
acctgcagggcagagcacaagaagaaacaccccgaagccagtgtcaacttcgccgagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagaaaaaggcaagtttgaa
gacatggcgaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggttcaaggatcctaatgcccccaagagaccaccgtctgcg
ttcttcatcttctgtgctgacttccgggccaagataaagagcgagcacccaggcctgtcc
attggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccgtacgagaagaaagcagccacgctgaaggagaaatacgacaaggatatcgcctca
taccgcaccaatggtagagtagatacggcctcctccgcagctgctgatgacgacgacgaa
gaggaggatgatgaggaagaggatgatgacgatgaggatgatgacgagtag

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