Salvelinus namaycush (lake trout): 120018886
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Entry
120018886 CDS
T07522
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120018886
G protein-coupled receptors [BR:
snh04030
]
Others
Chemoreception
Vomeronasal pheromone
120018886
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
120018886
NCBI-ProteinID:
XP_038818035
UniProt:
A0A8U0P4J5
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Position
Sna23:3653069..3657555
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AA seq
869 aa
AA seq
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MCLWGWLWLLYCLHVPGSVWGLDGGGEGACRLIAKPVSGSVFRAGDVVIGGLFPIHVEAP
LPEQEFRSIKGNSTCTIFNQRAYRWLQTMIFAVEEINRDPALLPNLTLGFLAADTCLSEG
TTLGAALAMVTGKEASVVGTECGTTPDVPVIIGDARSSASIVVAQTLGPFDLPMVSYFAT
CACLSDTWRYPSFFRTVPSDAFQARGMAKLLRQLGWVWVGLLSGDGDYGKFGVQLLLQEL
QGSGVCVAYSEVIPKVPSKRQIRHIADTIRGSTARVVVAFVGFTGHSGALMEEVVRQNIT
DKQWIASEAWVTYSTIAAPKNLPSLAGTIGFALKKADIPGLGPFLTRLHPDGNYQKSDPF
LWELWEEMFGCSLGVDLSMTLSSRRQCTGSEVIREGESQYADVSQLRASYNVYKAVYAIA
YAIQDMVACRPGDGVFNGGQCPDIRKLQPSQIVHYLRGVNFSTPVGESFHFDMNGDPPAS
YDIINWHVTPEGTAEFVQVGHFLSSEGSDDQFHIDMDKVVWGGGSGDEVPVSVCSADCPP
GTRHAVQKGRPECCFDCLSCAEGEISNTTGSVECIRCPERFWSNPDRTACIPQLVDFLSY
SDTMGVILSVISVSGATLTAGALATFLYHRHTALVKANNSEISFLLLLSLKICFLCALVF
IGQPKPWTCMLRHTLFGISFVFCISCLLSRTVVVLVAFRATLPGENLMRYFSPTQQRMGI
SLCTLIQVLICVLWLALAPPQPAERRGREGRGPRVVLECEVGSVVGFSLVLGYIGLLASL
CLLLAFLARKLPDNFNEAKLITFSMLIFCAVWISFIPAYVSSPGKYTVAVEIFAILASSF
GLLFCLFAPKCYIILLRPERNTKKHMMSK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctctggggctggctgtggctgctctactgtctccatgtccctgggtctgtctgg
ggtctggatggaggtggagagggggcttgtcggctgatagctaagcccgtctccggcagt
gtttttcgggcaggagatgtggtcattgggggcctgttccccatccatgtggaagcccct
ctgccagagcaggagttcaggagcattaagggaaattctacctgtacaattttcaaccag
cgtgcttaccgttggctccagactatgatttttgctgtggaggagattaaccgtgaccca
gccctcctgcctaacctcaccctggggttcctggctgctgacacatgcttgtcagagggc
accaccctgggggcagccctagccatggtgaccggcaaagaggcctccgtggtgggcaca
gagtgtggcacaacccccgacgttcccgtcatcatcggggatgcccgctcctcagcttcc
atcgtggtggcacagaccctcggaccgtttgatttacccatggtgagttactttgccacc
tgtgcgtgtttgagtgacacctggaggtacccctcattcttccgtacggtacccagcgat
gccttccaggctcgcggcatggccaagctgctgcgtcagctgggctgggtgtgggtggga
ctgttgtcaggggatggtgactatggcaagtttggggttcagctgcttctccaagagctc
cagggatctggggtgtgtgtcgcttactctgaggtcatccccaaggttccgtctaagaga
cagatcaggcacattgcggacaccatcagaggatctactgccagagtggtggtggcattt
gtaggattcacgggtcattcaggggccctgatggaagaggttgtccgccagaacattaca
gataagcagtggattgcctcagaggcctgggtcacttactctactatcgccgccccgaaa
aacctgccctctcttgccgggacaatcggttttgccctgaagaaagctgacattcccggc
ctggggcctttcctaacacgcctccatccagacgggaactaccagaagtccgaccccttc
ctgtgggaattgtgggaagagatgtttgggtgttctctgggggttgacctcagcatgacg
ctgtcgtccaggcgacagtgtactgggtcagaggtcatacgtgagggggagagccagtat
gctgacgtgtctcagctgagagccagctataatgtgtacaaggctgtgtacgccatcgcc
tacgccatacaggatatggtggcctgtcgaccaggggacggagtctttaatggtggacag
tgccctgatatcaggaagcttcagcccagccagattgttcattatctgaggggagtgaac
ttcagtactcctgtgggggaatctttccacttcgacatgaatggtgatccgcctgcctct
tatgacatcatcaactggcatgtgacccccgaggggacggcagagtttgtccaggtcgga
cattttctgtcctctgagggatcggacgaccagttccacatcgacatggataaagtggtg
tggggtgggggcagcggagatgaggtccctgtgtctgtatgcagtgctgactgtccccct
ggtaccaggcatgcggtacagaaggggaggcctgagtgctgctttgactgtctgtcctgc
gctgagggagagatcagcaacacaacagggtcagttgagtgtattaggtgtccagagcgg
ttctggtccaaccctgatcgtacggcctgcatcccccagctggtggacttcctctcctac
agcgacaccatgggcgtcatcctgtctgtcatctcagtttccggggcaacactcacagcc
ggtgccctggccaccttcctctaccaccgtcacacggccctggtgaaagccaataactct
gagatcagcttcctgctcctgctgtcactcaagatctgcttcctgtgtgcgctggttttc
attggccagccaaagccatggacgtgcatgctgagacacaccctgtttggtataagcttt
gtgttctgcatctcctgtctgctcagcaggactgtggtggtgctggtggccttcagggcc
actctgcctggagagaacctgatgagatacttcagccccacccagcagaggatgggtatc
tcactctgcacactcatccaggtgctgatctgtgtactgtggctggccttagctccaccc
caaccggctgagaggaggggcagagaaggtcgggggccgagggtcgtcctggagtgtgag
gtgggctctgtggttggcttctctctggtgctgggctacatcggcctgctggcctccctc
tgcctcctcttagccttcctggccaggaaactcccagacaacttcaacgaggccaagctc
atcaccttcagcatgctgatcttctgtgccgtgtggatctccttcatccctgcctacgtc
agctctcctgggaagtacacagtagctgtagagatctttgccatcctggcctccagcttt
gggctgctgttctgtctgtttgctccaaaatgttacatcatccttctgagaccagagaga
aacaccaagaaacacatgatgtccaaatag
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