Salvelinus namaycush (lake trout): 120019024
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Entry
120019024 CDS
T07522
Name
(RefSeq) vascular endothelial growth factor A-like isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04370
VEGF signaling pathway
snh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120019024
04370 VEGF signaling pathway
120019024
04020 Calcium signaling pathway
120019024
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120019024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120019024
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120019024
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Growth factors (RTK binding)
120019024
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120019024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Presenilin
Motif
Other DBs
NCBI-GeneID:
120019024
NCBI-ProteinID:
XP_038818145
UniProt:
A0A8U0P4H3
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Position
Sna24:complement(17127258..17151341)
Genome browser
AA seq
311 aa
AA seq
DB search
MELSLWPSWVLYTSISCTIYLGWSCFRSEAECYVILFHTMFGLAGIGHCRGCAMISHFSF
TLQEESEFLSVCGVSMSFPTFAAPGYNVFSASVQKVPSFVGLREGLKEGVSTEAYQSHSE
RGNERDTLMVISFMEVYNKSLCQPRELLVEIAQEYPEEVEHIFIPSCVVLTRCAGCCNDE
MLECTPTSTHNMTMEIKRIKPQRQENDIFMSFTEHSACECRPKKEVKEQRQKKPRKGKGK
GQKRKRKKNHDQKNREAQCEPCCDGCSERRKQGFIQDPLTCQCSCRNSNAHCRARYLELN
ERTCRCDKPRR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagtctctggccctcatgggttctttacacaagcataagttgcacaatatat
ttgggatggagctgctttcgatcagaagctgaatgttatgtgatattgtttcatactatg
tttggtttggctggtataggacactgcagggggtgtgctatgatttcccatttctccttt
actctccaagaggaatcagagtttttgtctgtttgtggtgtctcaatgtctttcccaaca
tttgcagccccaggctacaatgtttttagtgcttcagtgcagaaggtaccaagctttgtg
gggctgagagagggattgaaagagggagtcagtacagaagcataccagagccacagtgag
agaggaaatgagagagacaccttgatggtgatatccttcatggaggtgtacaataagagc
ctatgtcagcccagggagctgctggtagagatcgcacaggagtacccagaggaggtagaa
catatcttcatcccatcctgtgtggtgctgacgcgctgcgcaggctgctgcaacgatgag
atgctagagtgcacgccaacctccacgcataacatgaccatggagataaaaagaataaaa
ccccaaaggcaggaaaatgacatctttatgagttttacagaacacagtgcatgtgaatgc
aggccaaagaaagaagtgaaagaacagagacaaaaaaaaccccggaaaggcaagggcaaa
ggccaaaagagaaagcgaaagaaaaaccatgaccaaaagaatcgtgaagctcagtgcgag
ccatgttgtgatggctgttcagagaggaggaagcaggggttcatccaggaccctctgacc
tgccagtgttcctgcagaaactccaatgcccactgccgggcgcgttacctggagctcaac
gagaggacctgcagatgtgacaaaccaagaagatga
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