Salvelinus namaycush (lake trout): 120019024
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Entry
120019024 CDS
T07522
Name
(RefSeq) vascular endothelial growth factor A-like isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04370
VEGF signaling pathway
snh04510
Focal adhesion
snh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120019024
04370 VEGF signaling pathway
120019024
04020 Calcium signaling pathway
120019024
09133 Signaling molecules and interaction
04518 Integrin signaling
120019024
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120019024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120019024
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120019024
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Growth factors (RTK binding)
120019024
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120019024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Presenilin
Motif
Other DBs
NCBI-GeneID:
120019024
NCBI-ProteinID:
XP_038818145
UniProt:
A0A8U0P4H3
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Position
Sna24:complement(17127258..17151341)
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AA seq
311 aa
AA seq
DB search
MELSLWPSWVLYTSISCTIYLGWSCFRSEAECYVILFHTMFGLAGIGHCRGCAMISHFSF
TLQEESEFLSVCGVSMSFPTFAAPGYNVFSASVQKVPSFVGLREGLKEGVSTEAYQSHSE
RGNERDTLMVISFMEVYNKSLCQPRELLVEIAQEYPEEVEHIFIPSCVVLTRCAGCCNDE
MLECTPTSTHNMTMEIKRIKPQRQENDIFMSFTEHSACECRPKKEVKEQRQKKPRKGKGK
GQKRKRKKNHDQKNREAQCEPCCDGCSERRKQGFIQDPLTCQCSCRNSNAHCRARYLELN
ERTCRCDKPRR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagtctctggccctcatgggttctttacacaagcataagttgcacaatatat
ttgggatggagctgctttcgatcagaagctgaatgttatgtgatattgtttcatactatg
tttggtttggctggtataggacactgcagggggtgtgctatgatttcccatttctccttt
actctccaagaggaatcagagtttttgtctgtttgtggtgtctcaatgtctttcccaaca
tttgcagccccaggctacaatgtttttagtgcttcagtgcagaaggtaccaagctttgtg
gggctgagagagggattgaaagagggagtcagtacagaagcataccagagccacagtgag
agaggaaatgagagagacaccttgatggtgatatccttcatggaggtgtacaataagagc
ctatgtcagcccagggagctgctggtagagatcgcacaggagtacccagaggaggtagaa
catatcttcatcccatcctgtgtggtgctgacgcgctgcgcaggctgctgcaacgatgag
atgctagagtgcacgccaacctccacgcataacatgaccatggagataaaaagaataaaa
ccccaaaggcaggaaaatgacatctttatgagttttacagaacacagtgcatgtgaatgc
aggccaaagaaagaagtgaaagaacagagacaaaaaaaaccccggaaaggcaagggcaaa
ggccaaaagagaaagcgaaagaaaaaccatgaccaaaagaatcgtgaagctcagtgcgag
ccatgttgtgatggctgttcagagaggaggaagcaggggttcatccaggaccctctgacc
tgccagtgttcctgcagaaactccaatgcccactgccgggcgcgttacctggagctcaac
gagaggacctgcagatgtgacaaaccaagaagatga
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