Salvelinus namaycush (lake trout): 120019059
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Entry
120019059 CDS
T07522
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120019059
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120019059
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
120019059
NCBI-ProteinID:
XP_038818220
UniProt:
A0A8U0P4M5
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Position
24:19461275..19468099
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AA seq
960 aa
AA seq
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MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRI
SSLTLMGVKLIFVMEGEAPKLKAETMSKRTDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKRRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
HCDVSDLLAKMSLHSSTADNNTQQPSAAAAALTIATSNNSVLVLEGPESPKKHLDPGKNH
PRLEVRLGAQTQEVMSPPSFTSSGKIPEAAASSPSVSMVMDALHLSDIDWESQSFTSSPP
PQAAGARTATDLKSLQTTNDSVEERITKLGPSTDLRAAMAVPGPCYAECSLRDRILMRNT
CKSVNMADNDDVTTIHVNSQSAAPLDLIDSNKSGPKPMALIPIKSSNDSKPSEQLLVCGK
KATLVDKDQSIALPHKPRSAHHSSKPISLNSTQTGPVTATQTQGAKQHGAGEPKSPQKYR
FVKKAISSSALPQRSHSKPSDTQPGRDDRNMKSHQQTKKSVCASVCSSSEDSDTENQCRG
GGQSRAKVKPKSRPRCQYLTDYSLKPTSKPSTSTKAAWDTVTAQPLRPRAVSASMGEQPI
LGSSVSTIGKCQDVPPIRVDDIVFIPSPVSPVTISDGDDSVICSKSPLPLAERVKLKFLK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccattgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagaatt
tcctctctcacactgatgggggtaaagctaatttttgtcatggagggagaggcccccaaa
ctcaaagcagagactatgagcaagaggacagacatgagatttggggggtttgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcagcaggggaggct
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacgcttttctctacggagcgcagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacgctcgtgggtctggccattcttctgggctgtgattacattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggtgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaaaggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaagcactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacgtcgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacacgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagat
cactgtgatgtttctgacctcctggccaagatgtctttgcacagttccactgctgacaac
aacacccaacaaccctctgccgcggcagcagcactgaccattgcaacaagtaacaactca
gtgttggtcctggagggtccagagtctccaaaaaagcatctggatcctggtaaaaaccat
ccccgcttagaagtacgtcttggagctcagacacaggaagtgatgtcacctccgtctttc
acttcctctgggaagattccagaagcagcggcctcctctccgtctgtttccatggtgatg
gatgctcttcacctgagtgacatcgactgggagtctcagtcattcacgtcctccccgccc
ccgcaggctgctggcgctcgcactgccactgacctcaagtcactccaaaccacaaatgat
agtgtcgaagaaaggatcacaaaactgggcccctctactgatctcagagcagcaatggcc
gtaccagggccatgttatgcagagtgttcgctgagggacaggatcctaatgagaaacacc
tgcaagtctgtgaacatggcagacaatgatgatgtcaccaccatacacgtaaactcccag
tcagcagcacccctggatttaattgattctaacaagagtggccccaagccaatggcactg
atacccattaaaagcagcaatgattccaagccatcagaacagctgctggtgtgtggcaag
aaagccacacttgttgataaggaccagagcattgcattgccccataagcctcgatctgct
catcacagctcaaaacctatctcattgaactcaacacaaaccggcccagtcacagcaaca
caaacacaaggggctaaacaacatggtgccggtgaaccaaagtctccacagaagtacaga
ttcgtaaagaaggccatatcttcttccgctctgccacaaaggagccactctaaacctagc
gacacacagcctggtcgggatgacaggaacatgaagtcacatcaacaaaccaagaagagt
gtgtgtgccagtgtgtgttcatcgagtgaggacagtgacacagagaaccagtgtcgggga
ggagggcagagcagggccaaagtcaaacccaaaagcaggcccaggtgccaatacctcaca
gactactcactgaaacccacctccaaacccagcacctctacaaaggcagcctgggacaca
gtgacagcccaacccctcaggcctagagctgtgtctgccagtatgggtgaacaaccaata
ctaggcagctctgtgtctaccatagggaagtgccaggatgttcctccaattagagttgat
gacattgtgttcattccaagccctgtttccccagtgactatatctgatggtgatgactca
gtgatttgcagcaagagcccactgccattggcagagagggtgaagctgaagttcctgaaa
tga
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