Salvelinus namaycush (lake trout): 120019077
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Entry
120019077 CDS
T07522
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like isoform X1
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120019077
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120019077
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
SALM family
120019077
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120019077
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
ig
fn3
LRR_9
Ig_2
LRR_5
LRRCT
GP79
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120019077
NCBI-ProteinID:
XP_038818243
UniProt:
A0A8U0P5A9
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Position
Sna24:29763770..29778353
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AA seq
799 aa
AA seq
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MDHILCCLLVLGTAVLLTHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFSDLETLRSLHLDNNRLIELGPDDL
RGLVNLQHLILNNNQLGRISDRALEDLAPSLEDLDLSYNNLRSLPWDSVKLMVSLHQLSL
DHNLLDFIPEGTFTDLEKLARLDLTSNRLQKLPPDPIFARAQDSVMMTTPYAPQLSLGIG
GNPLHCNCEVLWLRRLERDDDQETCASPSNLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQMASLRCEAIGDPTPTIHWMAPDDRVLGNSSRTVVYGNGTLEILITTSKDYGTFTCI
AANVAGESTASVDLSIIQLPHLSNGTGQASQPKSRLSDITGTTRISKGVPKTPPEKVVTV
SEVTAISALVKWTVSKAAPKVKMYQLQYNCSDDEVLIYRMIPASSQAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIVILMVRYKATDHEGGGIGGSGKLTSVSDTHSQTNGGRLGQNGVPLPLPKPKAKVTLQD
EVVEFKCGSLQSTSSSSSSGGSVVGEGSYSPNSTLAIMWRQAAPSKPRANLDHLLGAFNS
LELRGAQGRGDLGEPSSSSSTPVAGGDRPHTDREPLLGRTMDSRLSRLLMLSHDSKPKRS
QSFDMGDCMDTDQQTDQAMASSTSTATTPVCSYPRRISNIWTKRSLSVNGMLLQCDEEGD
MGGSKGTFDSQEWVMESTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgttgttgacccacgca
tgcccaaagtactgtgtgtgccagaacctgtccgagtccctggggaccctgtgtccctcc
aaaggcttgctcttcgtcccactggacatcgaccggcgcactgtggagctccggctgggc
ggaaactacatcctccgcatcacccagcaggactttgccaacatgaccgacctggtggac
ctgacgctcagccgcaacaccatcagctacatccagcccttctccttcagcgacctggag
accctgcgctccttacacctggacaacaaccgcctcatagagctgggtcccgatgatctc
cggggcctggtcaacctgcagcacctcatccttaacaacaatcagttgggacgcatctcg
gaccgggccttggaagacctggcaccctccctagaggatctggatctgtcctacaacaac
ctgaggagcctgccctgggactcagtcaagctgatggtctccctccaccagttgagtctt
gaccataacctcctggacttcatccctgaggggacctttactgatctagagaaactggct
cgcttggatctcacctccaaccgactgcagaagctgcccccagaccccatcttcgccagg
gcccaggattcagtgatgatgaccactccctatgccccccagctgtcccttggcatcggg
gggaaccccctgcattgtaactgtgaggtgctgtggctgcggcggctggagagggacgat
gatcaggagacatgcgcttccccttccaacctgaaggggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccacccctcatcactcagcacacccacaggatgctggtg
ctggagggccagatggccagcctgaggtgcgaggccattggagaccccacccccaccatc
cactggatggcccccgacgaccgtgtccttggcaactcgtcccgaactgttgtctacggc
aacggcaccctggagattctcatcaccacctccaaggactacggtaccttcacctgcatc
gcggccaacgtggccggggagtccaccgcctcagtggatctgtcaatcatccagctgccc
cacctcagcaacggcaccggtcaggcctcacagcccaagtcccgcctctcggatatcacc
ggcaccaccaggataagcaagggggttccaaagacccccccggagaaagtggtcactgtg
tcagaggtgacggccatttcagccttggttaagtggaccgtcagcaaggcagcgcctaag
gtaaagatgtaccagctccaatacaactgttccgacgatgaagtcctcatctacaggatg
atcccggcctccagccaagccttcctggtgaccaacctggtgtcggggaccaagtacgac
ttgtgtgtcctggccgcctgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgtgcccagttctttacccgcgacgactacacacagtgccagtctctccacagccag
tttctggggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcgttatcctgatggtgcgctacaaggccaccgaccatgaggggggtggcatcggg
gggagcggcaagctgaccagcgtaagtgacacccactcacagaccaatgggggccggctg
ggacagaacggcgtgccccttcccctgcccaaaccaaaggccaaagtgaccctccaggat
gaggtggtggagtttaaatgtggttccctccagagcacctcgtcctcatcctcgtcgggg
ggctcggtggtcggggagggttcctacagccccaacagcaccctggccattatgtggagg
caggctgccccctctaagcccagggcaaacctggatcacctgctgggggccttcaactcc
ctagagctccggggggcccagggcaggggagacctgggggagccctcatccagcagtagc
acaccggtggcgggtggcgataggccccacacggacagggagcccctgctgggccggaca
atggactcgcggctgagccggctgctcatgttgtctcatgactcaaaaccaaaaaggagc
cagtcgtttgacatgggggactgtatggatacagatcaacaaacagaccaagcgatggcc
tctagcacctccactgccacaacgccggtgtgcagttacccgcggcgcatcagcaacatc
tggactaagaggagcctgtctgtgaacggcatgctgctacagtgtgatgaggaaggggat
atgggggggagcaaggggacctttgacagtcaagagtgggtcatggagagtactgtctag
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