Salvelinus namaycush (lake trout): 120019163
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Entry
120019163 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04114
Oocyte meiosis
snh04218
Cellular senescence
snh04261
Adrenergic signaling in cardiomyocytes
snh04270
Vascular smooth muscle contraction
snh04510
Focal adhesion
snh04810
Regulation of actin cytoskeleton
snh04910
Insulin signaling pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120019163
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120019163
04218 Cellular senescence
120019163
09144 Cellular community - eukaryotes
04510 Focal adhesion
120019163
09142 Cell motility
04810 Regulation of actin cytoskeleton
120019163
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120019163
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120019163
04270 Vascular smooth muscle contraction
120019163
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120019163
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120019163
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120019163
03019 Messenger RNA biogenesis [BR:
snh03019
]
120019163
03041 Spliceosome [BR:
snh03041
]
120019163
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120019163
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
120019163
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120019163
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120019163
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120019163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
120019163
NCBI-ProteinID:
XP_038818385
UniProt:
A0A8U0P4Y5
LinkDB
All DBs
Position
Sna24:30045014..30064874
Genome browser
AA seq
327 aa
AA seq
DB search
MAESELNVDSIISRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDESLMCSFQILKPSEK
KAKYQYGGVNTGRPVTPPRTAQAPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcgagctcaacgttgacagcatcatctcccgattgcttgaagtgcgagga
tgccgtccagggaagatagtccagatgacggaggcggaggtgcgggggttgtgcatcaag
tcccgggagatcttcctcagccagcccatcctactggagctggaggcgccgctcaaaatc
tgtggtgatatccatggccagtacacagacctgctgcggctctttgagtacgggggcttc
ccgccggaggctaactacctgttcctgggggattacgtggaccgaggcaagcagtccctg
gaaaccatctgcctactgctggcctacaagatcaaataccccgagaacttcttcctgctc
agaggaaaccacgaatgtgcctccatcaaccgcatctacggtttctatgacgagtgcaaa
cgcagattcaacataaagctgtggaagacattcacagattgcttcaactgtttgcccatt
gccgctataatcgatgagaagatcttctgctgccatggaggtctctctcctgatctgcag
tccatggagcaaatccgacgcatcatgaggcccactgatgtccctgacacaggcctgctg
tgtgacctgctgtggtcagatccagacaaagacgtgcagggttggggggaaaacgaccgg
ggtgtctccttcacctttggggctgacgtggtcagcaagttcctcaaccgccatgacctg
gacctcatctgcagagcccaccaggttgttgaggacggctacgagttctttgccaaacgg
cagctggtgacgctgttctcagctcccaactactgcggggagtttgacaacgctgggggc
atgatgagcgtggacgagtccctcatgtgttcctttcagattttgaagccgtcagagaaa
aaagctaagtaccagtatgggggagtgaacacgggacgccctgtaaccccgcctcgtact
gcccaagccccaaagaagaggtga
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