Salvelinus namaycush (lake trout): 120019172
Help
Entry
120019172 CDS
T07522
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120019172
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120019172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120019172
Spliceosome [BR:
snh03041
]
Complex B
Other components
Prp19-related factors
120019172
Complex C
120019172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
120019172
NCBI-ProteinID:
XP_038818397
UniProt:
A0A8U0P517
LinkDB
All DBs
Position
Sna24:30730814..30744011
Genome browser
AA seq
537 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRKEPPPYGYRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGGDKGGEDGEARERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRASSEAQYDQRLFNQSKG
MDSGFAGGEDEMYNVYDQPFRRGSDMAQNIYRPTKSSDKDMYGDDLDTLMQSSKFVPDRE
FSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSRGSKDYDHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttacgagctttctacctgcgccgacccagctgtcccaggaccagttggagtca
gaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcaaagaa
ccccctccctacggctacaggaagagctgggtgccacgctctctggaggactttggagat
ggcggtgccttccctgagatccacgtggcccagttccctctggagatgggcaggaagaaa
aagacatccaatgccctggccgttcaggtggatgctgaaggcaagatcaaatacgatgcc
atcgccagacagggacagggcaaggacaaagtgatcttcagtaagtacacagacctgctt
cctaaggaagtgctgaacgatgatgctcctgagctgcagaagcctgacgaggaggctgtc
aaagagctgacggagaagacccgcgatgctctgatgaagcaggtctctcagaagatcgct
gcagccatgcctgtgagggcagcagacaaacaggcccctgcacagtacatcaggtacact
ccttcccagcagggtgtggccttcaactccggggccaaacagagggtcattcgtatggtg
gagatgcagaaggaccccatggagcccccacgcttcaagatcaacaagaagattcctcgt
ggtcctccctcccctcctgcaccagtcatgcactctcccagcagaaagatgactgtcaag
gagcaacaggagtggaagattcccccctgtatttcaaactggaagaatgcaaagggttac
accatcccactggacaagcgtctggctgcggacggtagaggactgcagaccgttcacatc
aacgagaactttgccaaactggccgaggcgctctacattgctgacagaaaggccagagag
gctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaagaag
gaggagaagctcagagagctggctcagatggcccgagaccgcagggcagggatcaaaggt
cacggaggggacaaaggtggagaggacggtgaggccagagagcgtgacgagatccgtcat
gacaggagaaaagagagacagcacgacaggaacatctccagagctgcccctgataagagg
tcgaagctgcagagagaccaggacagagatgtcagtgagctcatcgctctgggccagccc
aaccctagagcctccagcgaggctcagtacgaccagagactgtttaaccagagcaagggt
atggacagtggttttgccggtggggaggatgagatgtacaacgtgtacgaccagccgttc
aggagaggcagcgacatggcccagaacatctacaggcccaccaagagctctgacaaggac
atgtatggagacgacctggacacactcatgcagagcagcaagtttgttccggaccgtgag
ttctctggtacggaccacggtcctcgtcgtgacggccctgtccagtttgaggaggatccg
ttcggtctggacaagtttttggaggaggcgaagcaacatgggggctccaagagaccctcc
accagtagaggctccaaggactacgaccacgacaagaaacgcaggaaggagtga
DBGET
integrated database retrieval system
