Salvelinus namaycush (lake trout): 120019178
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Entry
120019178 CDS
T07522
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120019178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120019178
Spliceosome [BR:
snh03041
]
Complex A
U1 snRNP components
U1 related factors
120019178
Complex B
120019178
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Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
120019178
NCBI-ProteinID:
XP_038818408
UniProt:
A0A8U0P5L8
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Position
Sna24:complement(31573307..31606772)
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AA seq
865 aa
AA seq
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MSFPHLNRPLLPPGIPPPQFSGFPSGTPMIPVHMGIMTQNPTVLVPTSMPVVSKPAAPRK
ESPLDENSGPTTTVFVGNISDKASDMLIRKLLAKCGLVLSWKRVQGASGKLQAFGFCEYK
EPESTLRALRLLHELQIGEKKLLVKVDAKTKAQLDEWKGKKKSSTNGNGKAEAEDGKEEE
EEEVIDKDTQMRDQIVKGTIDGLIREYASDLKAPLNDDESQQRRKRKEKKEEEDINAIDG
LEDDKRDLISREISKFRDTHKKLEEEKDKKEKERAEFERERRERDKERERERERRDRERE
KEREKEREKERERERERERERSDRDRDRDRNRTKERERERERSRDRSKDRSHSRDREVSR
DKDKKRDQEDEEEVYERRRLERKLRDKEAAYQERLKNWEIRERKKARDYSKESEREEERR
REMTKEGKRLKEFLEDYDDDRDDPKFYRGSALQKRLRDREKETEMDERDRKREKEELEEI
RQRLLAEGHPDPEAEIRRMEEEAERLRQPPVKLEPDPEEERVHKAPREDRDRRGDRERER
GDRDRERERERGDRDRERERERGDRERERGDRDRERERERDRGDHHPHLHSDDDVEEGEE
FEDDDQSGSKPCLKPTLRPITAAPSVSSASGGATPNTPGDESPCGIIIPHENSPPHEATP
PYEALSQEEYRPKIGLSLKLGAPNVTSPSQPNVAIKRKKLTVDSVFNKFDEEEADEAPRK
RKLVPLDYGDDDKNLQSMVDGASGLAAIKGANTEEKRKHIKSLIEKIPTGKTELFSYPLD
WSAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQGILDDVAMVLDEE
AEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcatctcaaccgacccctgttgccaccgggaatcccccctccacagttc
tctggttttccttcaggtaccccaatgataccagtccacatgggcatcatgacccagaac
cccacagtcctggtacccacctccatgcccgtggtcagtaagcccgcggcccccaggaag
gaatctcccctggacgagaacagcggccccaccaccacagtgtttgtaggaaacatctcg
gacaaggcctcggacatgctgattcgaaagttgctggcgaaatgtggcctggtcctaagc
tggaagcgagtccaaggagcctctggaaaacttcaagcttttggattctgtgagtacaag
gaaccagagtcgacgctgcgggccctgcgactgctccacgagctgcagatcggggagaag
aagctgctggtgaaggtggacgccaagaccaaggcccagctggacgagtggaagggcaag
aagaagagtagcaccaacggcaacgggaaggcggaagcagaggatggaaaagaggaggaa
gaggaggaggtgatcgacaaggacacccagatgcgggaccagatcgtcaagggcaccatc
gacggtctgatccgagagtacgccagcgatctcaaagctcccttgaatgatgatgaatct
cagcaacgcaggaaaaggaaagagaaaaaagaggaggaggatatcaacgcaattgacggg
ttggaggatgacaagagagacctgatttccagagagatcagtaaattccgtgacacccac
aagaaactggaggaggagaaggacaagaaggagaaggagcgtgcagagtttgagcgtgag
cgacgggagagggacaaggagagggagcgtgagagggagcgacgggaccgcgagcgggag
aaggagcgggagaaggagcgtgagaaggagagggagagggagcgcgagagagaacgggaa
agaagtgacagagacagagatcgtgaccgcaaccggacgaaagagagagaacgggagagg
gagaggagccgcgacaggagcaaagaccgcagccactccagagacagagaggtgagtcgc
gacaaggacaagaagcgtgaccaggaggatgaagaggaggtctatgagaggagaaggctg
gagagaaagctcagagacaaggaggcagcctaccaagaacgcttgaagaactgggagatc
cgcgagaggaagaaggctcgagactactccaaggagtctgagcgggaggaggagcgtagg
agagagatgactaaagaaggcaaacgtctgaaggagttcctggaggactatgatgacgac
agggatgaccctaagttctacaggggcagcgcgctgcagaagcgtctgcgagaccgggag
aaggagactgagatggacgagcgcgacaggaagagagagaaggaggagctggaggagatc
agacagaggcttttggccgagggacaccccgaccccgaggccgaaatacgcaggatggag
gaggaggcagagcgtctgcgccagcccccggtgaagctggagccggatcccgaggaggag
cgggtacacaaggccccacgggaggaccgggaccgccgaggagaccgggagagagagcga
ggagaccgggacagagaaagggagagagagcgaggagaccgggacagagaaagggagaga
gagcgaggagaccgggagagagagcgaggagaccgggacagagaaagggagcgagagaga
gacagaggggaccaccatccccacctccactcagatgatgacgtggaagagggggaggag
tttgaagacgacgaccaatcagggtccaagccctgcctgaagcccacactgcggccaatc
acggcggccccctctgtgtcgtcggccagcgggggcgccacccccaacacgcccggggac
gaatcaccatgcggtatcatcatccctcacgagaactctcccccccacgaggccacgccc
ccttacgaggccctgtcccaggaagagtaccgccccaagatcggcctcagtctcaaactg
ggagcccctaacgttaccagccccagccagcccaatgtggccatcaaacgcaagaagctc
actgtggacagtgtcttcaacaaattcgacgaggaggaggcggacgaggctccccgcaag
cgcaagctggtgccgctggactacggtgacgatgataaaaacctccagagcatggtggat
ggtgcctcgggactggcggccatcaagggcgccaacactgaggagaagcgcaagcacatc
aagagcctgatcgagaagatccccacgggcaagacggagttgttctcttacccgctggac
tggtccgccgtggactcgactctgatggatcgacgcatacgcccctggatcaataaaaag
ataattgagtacattggagaagaggaggctacgctagtggattttgtctgctcaaaggtg
atggctcatggtacaccacagggtatcttggatgatgttgccatggttctggatgaagaa
gcagaagtcttcatagtcaagatgtggaggttgctgatctacgaaacagaggccaagaag
attgggctggtgaaataa
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