Salvelinus namaycush (lake trout): 120019250
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Entry
120019250 CDS
T07522
Name
(RefSeq) grainyhead-like protein 1 homolog
KO
K09275
transcription factor CP2 and related proteins
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120019250
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
120019250
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GFIT
Motif
Pfam:
CP2
DUF6039
Motif
Other DBs
NCBI-GeneID:
120019250
NCBI-ProteinID:
XP_038818496
UniProt:
A0A8U0P5X4
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Position
Sna24:5579364..5597512
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AA seq
609 aa
AA seq
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MTQELGKKRGVLVLQNEPSYSGGQRQAFTEDDEAWRAFLENPLTAASKAMMSINGDEDSA
NALGLLYDYYKVPRDRRTTGQPKTEVLLGNTDPNKINVMMPLQDSALRAVPRNTAAKGSS
QPSRGDKIRALYPASDSIVCLSSPPSYSISTGRALALHSFPVGLPPGPHSSHSSQSDGMA
FSHQLNHSQYSPRAKSLTPDSTYTEPYKDSSNEVFPLSEELQQRMASIPPGGYPYYSLTA
SQHFEYMLEAPQSIRPKSGSGQMSYLNKGQFYPITLRELGGPTVLPHLNGAFRSVVMLVF
GEEKFTDDQLKHWRYWHSRQHTAKQRCIDIADYKESFNTIASIEEIAYNAISFTWDTKDE
PRVFVSVNCLSTDFSPQKGVRGLPLNLQIDTYSCGGHGDKLVHRAYCQIKVFCDKGAERK
IRDEERKQTQRKGRGQETTAACVEDPLKLKHVDITSFKAMSDMDSQPVLFIPEVYFPSTQ
RHHACLSDDGEDGLGQKRLLHYDEEFDSATHKRARREEPEKVLLYVRKETEEVFDALMLR
TPTLAGLLEAVSDKYELPLGKMGKVYKRCKKGILVHMDDNIIKHYSNEDAFHIRMEEVGG
KVLLTLTEI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggagcttggcaaaaagaggggtgttctggttctccagaatgagccgtcgtac
agcggcggtcagcggcaagcattcacggaggatgacgaggcatggagggccttcctggag
aaccccctgactgccgcctccaaggccatgatgagcatcaatggagatgaggacagtgcc
aacgctctgggcctgctctacgactactacaaggtgccacgagataggagaacgactgga
cagcccaaaacagaagtgctcctgggcaatactgatccaaacaaaataaatgtcatgatg
ccactccaagactctgccctgagggccgtccctcgcaacactgcggccaagggcagcagc
caacccagccggggggacaagatccgggctctctacccagcctcagactccatagtctgc
ctctccagccctccctcctactccatcagcacagggcgggccctggccctgcactccttc
ccagtgggcctcccccctggtccccacagctcccacagttctcagtccgacggaatggcc
ttcagtcaccagctcaaccacagccagtacagccccagagccaagagcctcacacccgat
tccacctacacagagccctacaaggacagctccaatgaggtcttccctctctcggaggag
ctccagcaacgtatggcctccatccctcccggtggatacccttactacagcttgacagca
agtcaacactttgagtacatgctggaggctccccagtctatccggcccaagagcggcagt
ggccagatgagttacctgaacaagggccagttctaccccatcaccctgagagagctaggg
ggccccacggtcctaccccacctcaatggagcattccggagtgtggtgatgctggtgttt
ggagaggaaaagttcacagatgaccagctcaaacactggagatattggcacagcagacag
cacacagccaagcagcgctgcattgatattgctgactacaaagagagcttcaatacgatt
gccagtattgaggagattgcctacaatgccatctctttcacatgggacactaaggacgag
ccacgggtgtttgtgtcagtgaactgtctgagtacagacttctcccctcaaaagggagtg
cggggccttcctctcaacctccagattgacacctacagctgtggtggccatggtgacaag
ctagtgcacagagcctactgccagatcaaggtgttctgtgacaaaggtgccgagaggaag
atccgagacgaggagaggaagcagactcaaaggaagggaaggggacaggagacaactgca
gcctgtgtggaagaccctctgaagctgaagcatgtggacataacatcgttcaaagccatg
agtgatatggactcccagccggtcctcttcatccctgaggtttacttccccagcacccag
cgccaccatgcatgcctatcagatgacggtgaggatggcttggggcagaagagactgctc
cactatgatgaggaatttgactctgccactcacaagagagccaggagggaggagccagaa
aaggtgctgctctacgtccgtaaggagacagaggaggtgtttgatgctctaatgctgagg
acgcccactctggcaggactactggaggctgtatctgataaatatgagctgccgcttgga
aaaatggggaaagtctacaagaggtgcaaaaaagggatcctagttcatatggacgacaac
atcatcaagcattactccaacgaggatgccttccacattcgcatggaggaggtcggggga
aaggtcctgctgacactgaccgagatctga
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