Salvelinus namaycush (lake trout): 120019427
Help
Entry
120019427 CDS
T07522
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120019427 (sox11b)
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120019427 (sox11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF3246
Motif
Other DBs
NCBI-GeneID:
120019427
NCBI-ProteinID:
XP_038818645
UniProt:
A0A8U0TJT5
LinkDB
All DBs
Position
Sna24:4942917..4945180
Genome browser
AA seq
372 aa
AA seq
DB search
MVQQTEHSETESSREATDTEESELMACSPVPLKSLKADWCKTATGHIKRPMNAFMVWSKV
ERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERLRLQHMADYPDYKYRPKK
KPKLDSSTKPAAQSPEKINIKPVKAPGKKFVKLKTMKAVTTRPSHDPRYDYVFTSFTTSK
SVKIEYSDEDDDEEDYEEEVFSRIKMEEDEEPIPYNIAKVPASPTLSSTAESEGASMYEE
SRNANAAPNRLFYNFKNITKQNTICPASLSPASLSPASSFRSVSTSSSSSEDADDLLVDF
SLNLASSAHGVELGTSNSGNLSLSLVDKDLDSFSEGSLSSHFDFPDYCTPELSEMIAGDW
LDANFSDLVFTY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacagaacacagtgagacggagagtagcagagaagctacagacactgag
gagagcgaactgatggcgtgtagcccggtgccactgaaatcattgaaagctgactggtgc
aagacagcaaccggtcacatcaaaagacccatgaatgcatttatggtgtggtcgaaagtc
gagaggagaaagatcatggagcagtctccggacatgcacaacgcggaaatctccaaaaga
ctgggaaagcggtggaaattgttgaaggacagtgaaaagatcccgtttatcagggaagcc
gagagactccggctacaacacatggctgactaccctgactacaagtaccgacccaagaag
aaaccaaagctcgacagttccacaaaaccagccgcccaatcaccggagaagattaacatt
aaacctgtaaaagccccgggtaagaaattcgttaaattaaaaactatgaaggcggtgaca
acgagaccgtctcacgaccctcgttatgactatgttttcaccagttttacaactagcaaa
tctgtaaaaattgaatattctgatgaggatgacgacgaagaggactacgaggaggaagtg
ttctctcggattaaaatggaagaggacgaggaaccaataccgtacaacatcgccaaggtg
cccgcgagccccactctgagctccactgcagagtctgagggcgcgagcatgtacgaggag
tcccggaatgcgaacgcagctcctaacagactgttctacaatttcaagaacattaccaag
cagaacacaatttgccctgcatcactctcaccagcatcactctcaccagcatcttcattc
aggtcggtctccacctcgtccagttccagcgaagacgccgatgatttactggttgacttc
agtttaaatctagcctccagtgctcacggagtggagctggggacctcgaattcaggaaat
ctgtctctttccttggtggataaggacttggactctttcagtgagggcagccttagctct
cactttgatttcccagactattgcacccccgaattgagcgaaatgatcgcaggtgattgg
cttgacgctaacttttcagatttggtgtttacctactag
DBGET
integrated database retrieval system
