Salvelinus namaycush (lake trout): 120019482
Help
Entry
120019482 CDS
T07522
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120019482
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120019482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-met
B129_C2H2-zf
Zf-C2H2_ZNF451
Zap1_zf1
zf-BED
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
120019482
NCBI-ProteinID:
XP_038818710
UniProt:
A0A8U0P5V6
LinkDB
All DBs
Position
Sna24:2681777..2697850
Genome browser
AA seq
782 aa
AA seq
DB search
MCGSSQGFTASSSSQNSTAMLTSDGSPFHHTTSVSTPTLTDSNPQDIDMTLWSEAEFQER
CTYILKDHPLDLGNHPENQNKTKAERSLPRNLVLKRCPDSAEVLGVTSRELIQKGTRFGP
LVGQTYSNDMVPKDANRKYFWRVFSGGRLHHILDGLDEEKSNWMRYVSPARRPEDQNLAA
CQTGMAIYFYTVRAVPPGQELLVWYCPEFAHRLNYPPPGELFPERVEQNNVRGKSSGKTG
HSMSEILRMEHTKPDPTCPRLPKSALSPPCSPVLPLCPSVVYSSYPPIPYCGPPIPKRSL
SSRVSPNMHRVKPSLGSPVTAKHYTVSSLPGRMYPSSLCSPYLIPHFPLGINSLLPHTYP
LYSDRIAPHQPFPPHMLPFEVYPHVLRPSANVHKELLLALTTTPKNLSLPSGSRDLPLAL
TKSKKDLNCMPTNGCKHLGNHVPSPKNYLKNLPLTPADNFSDPKHSPASSTFDDQPLPAT
SSMATCLAPRGGSPLAGLAASSDYLPSKRTSALLSSSHSAEEGAVDLWKARHGGRVIGYK
TLSYPLTRKNGKIRYECNICSKLFGQLSNLKVHLRVHSGERPFRCQTCSKDFTQLAHLQK
HFLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCLARFTQYAHLKLHKRL
HTGERPYHCPHCLCAYLNYCSLQVHLQGFCPSGPDRSGSVPSVEELHRVNAAIEQFDLSK
AAERLEAMAAGAETEKGSGSTSILLQEMELERKSSNRFNGANGNMSLVERGLQCSSEGIL
CP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcttcctcccagaacagcacagccatg
ttaacctcagatggctccccctttcaccacactacatcggtctccaccccgaccctgacc
gactcaaacccccaggacatagacatgaccctctggagtgaggccgagttccaggagagg
tgcacctacatcttgaaggaccacccgttggacctgggtaaccacccagagaaccagaac
aagaccaaggctgagaggtctctaccccgaaacttggtcctgaaacgctgccctgactct
gcagaggtgcttggggtgaccagtcgggagctcattcagaaggggacacggttcggccct
ctggtgggccagacctacagcaatgacatggtgcccaaagatgccaacaggaagtacttc
tggagagtattctcagggggtcggttacatcacatcctggacggcttggacgaggagaag
agcaactggatgcgctacgtcagcccggcccgtcgtccagaggaccagaacctggcggcg
tgccagactggcatggccatctacttctacacggtgagagccgtgccaccgggccaggag
ctgctggtgtggtactgcccggagttcgcccaccgtctcaactacccgccccccggagag
cttttcccggagagagttgagcaaaacaatgttcgtggaaagagttcagggaagacgggg
cacagcatgtccgaaatcctgaggatggagcacaccaagcccgatcccacttgcccccga
ctccccaaatcggcactgtccccaccctgcagccctgtcctacccctgtgcccctctgtg
gtctactccagctacccacccatcccgtactgtggcccccccatccccaaaaggtccctc
agcagccgtgtcagccccaacatgcaccgtgtcaagcccagtctgggcagccccgtcaca
gccaaacattacacagtgtcgtcattgccaggtcgcatgtaccccagttcgctgtgcagt
ccgtacctcatacctcacttcccgcttggcattaacagcctactacctcacacatacccc
ctgtacagtgacagaatagctcctcatcagccatttccgcctcacatgctgccgtttgag
gtgtacccgcacgttctgcgcccatctgccaatgtacacaaagagctccttcttgcactg
accactaccccaaaaaacctctcactgcccagtggcagcagagatctgcccctcgcactg
accaaaagcaaaaaagacctcaattgtatgccgaccaatgggtgcaaacaccttgggaac
catgtgccttcaccaaagaattacctcaaaaacctacctttgacaccagcagacaacttt
agtgaccccaagcattcacctgccagcagcaccttcgatgaccagcctctaccagccacc
tcttccatggcaacctgcctcgcacccaggggaggctcaccgctggcgggcctggctgcc
tcttctgactacctcccctccaagcgcacatctgccctgctgagctccagccacagtgca
gaggaaggggcagtggacctgtggaaggccaggcatggtggacgggtcatcgggtacaag
accctgtcctacccgctcacacggaagaatgggaagatccgatacgagtgcaacatctgc
agcaagctcttcggtcagctgtccaacctcaaggtccacctgcgcgtccacagtggagag
cggcccttcaggtgtcagacctgcagtaaggacttcacccagctggcccacctgcagaaa
cacttcctggttcacactggggagaagccacacgaatgccaggtgtgccacaagcgtttt
agcagcaccagcaacctcaagacccacctgcgtctccactcaggtgagaagccctaccag
tgtaagctgtgcttggcccgcttcacccagtatgcccacctcaagctccacaagcgcctg
cacactggcgagcgcccctaccactgcccacactgcctatgcgcctacctcaattactgc
agcctccaggtgcacctccagggtttctgcccctccggacccgaccgctcgggctctgtc
ccctctgttgaggagctccaccgtgtcaatgccgcgattgagcagttcgacctgagcaag
gctgcggaacgcttggaggcaatggcagcgggagctgagacggagaaggggagcggcagc
acgagcatcctgctgcaggagatggagttggagcggaagagctccaaccgttttaacggc
gccaatgggaatatgtcactagtcgagcgcggcctacaatgcagcagcgagggaatcctc
tgtccttag
DBGET
integrated database retrieval system
