KEGG   Salvelinus namaycush (lake trout): 120019512
Entry
120019512         CDS       T07522                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K19479  collagen type X alpha
Organism
snh  Salvelinus namaycush (lake trout)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 120019512
NCBI-ProteinID: XP_038818736
UniProt: A0A8U0P6E4
LinkDB
Position
Sna24:8824558..8829662
AA seq 661 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVAKQQQHYPTKSHVQTVSGEPGIPGSPGEPGP
MGPPGPPGNNGVGHPGQQGPPGAPGPAGYSAAGKPGNPGGPGKPGSNGMPGEKGHTGATG
AMGPRGSPGSAGSPGPAGYSSAGKPGPHGLPGGMGPRGESGLKGHPGIPGLQGQKGERGV
GIPGAPGANGQVGPMGPSGMPGQPGVGKSGAPGYPGESGKSGTPGRDGAPGAMGQPGPKG
HNGNPGVGAPGKSGENGSPGMPGNMGPKGPQGHAGQPGAPGLPGVGKPGANGMPGDRGSP
GTSGTTGQKGEPGPTGYTGATGATGLMGPAGPQGARGFQGEPGMQGSKGDVGMLGAPGAK
GTKGDQGHQGYAGKAGIPGAAGPPGATGATGHQGNKGAQGHAGSPGQPGSNGLAGAKGHP
GTPGGPGKPGESGIQGTRGPVGPSGPAGQAGLRGHAGLPGAPGPAGQMAKGMSGPMGPPG
APGSRGHDGNPGAMGPPGPPGPPGEMVYHHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLT
MAYPSAGSPVPFNQIIYNGEQHYDPQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGE
PIMFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAADNVHCSFTGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacctcagagtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatactaccatgtacagaaagtagccaagcagcagcagcattatcctactaagagc
catgtccaaactgtttcaggtgagccaggtattcccggatcccctggtgagccaggacct
atgggcccccctgggcctcccggcaataacggcgtgggacatcctggacaacagggccca
cccggggcccccggacccgctggctactccgcagctggcaagcctggcaatccaggtggt
cctgggaaaccaggtagtaatggaatgcccggtgagaagggtcatactggtgcaactgga
gccatgggtccaagaggatcccccggttccgctggaagcccaggacctgctggatactct
tctgctggcaaacctggcccacacggtctgcccggaggcatggggccaaggggtgagagt
ggacttaaaggacatccaggtatccctggtctgcaaggacaaaagggagagaggggagtt
ggtattcctggggcaccaggtgcaaacggtcaagtgggcccaatgggaccctctggtatg
ccagggcaacccggagttggtaagtctggtgcccctggataccctggggagtctgggaag
tcaggtactccaggtagggatggagctccaggagctatgggtcagccagggccaaagggc
cacaatggaaaccctggggtaggagcaccaggaaaatcaggtgagaatggcagtccaggt
atgcctggaaatatgggacctaaaggtccccagggacatgccggacaaccaggtgcacct
ggcttaccaggagttggtaaaccaggagctaatggcatgccaggtgacagaggatcaccc
ggtacatcaggaaccaccggtcagaaaggagagccagggccaacaggttacactggggca
acaggtgctactggccttatgggtccagctgggccacagggtgctagaggattccaggga
gaaccaggtatgcagggatctaaaggagatgtcggcatgctgggagctccaggggcaaag
ggaaccaagggggatcagggacatcagggttacgcagggaaggcaggtatccccggggca
gcaggcccacctggtgcaaccggcgctacaggacatcagggtaacaagggagctcagggc
catgctggctctcctggtcagccaggttcaaatgggcttgcaggagcaaagggacaccca
ggcacacctggaggcccaggaaaaccaggcgagagcggcatccaaggaacaagaggacca
gtggggccttcaggtccagcaggtcaagcaggtcttaggggtcacgcaggtcttcccggt
gcacccggcccagctggccagatggccaagggaatgtctggtcctatgggtccacctgga
gctcctggttccagaggtcacgatggtaacccaggtgctatgggacctcctggcccacct
ggtccccctggtgagatggtctaccatcacgagaagagcatgcccatcaagtcccatgag
attatgatgcctcatgagatgatgaaggcccctatgtccgccttcagcgctgttctgacg
atggcttacccatctgcgggttcacccgttccattcaaccagattatttacaatggggag
cagcactatgacccccagactggcatcttctcctgccaggtaccaggtctctactacttc
tcctaccatatgcatgttaacggtgctaatgcattggtggcactgtacaaaaatggtgag
ccaatcatgttctcatacgatgagtacaacaagggcttcttggatcagttatctggcagc
actgtacttatgctgaatgcccatgaccaagtctacattcaggtccctgatgaggagacc
aatggtgtctttgctgctgacaatgttcactgctctttcactgggttcctgattgcctca
acgtga

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