KEGG   Salvelinus namaycush (lake trout): 120019528
Entry
120019528         CDS       T07522                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120019528
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120019528
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_DCAF4 ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_SCAP WDR54 TAF1C_beta-prop MIOS_WD40
Other DBs
NCBI-GeneID: 120019528
NCBI-ProteinID: XP_038818752
UniProt: A0A8U0P6D3
LinkDB
Position
Sna24:1272262..1281281
AA seq 663 aa
MLFRSIVDRGVRKRRRNDLSPKYPLSSLLDGYQCARHDEHISYGNMGVAVPPFGCAFSTA
RGLQSVFAVANEEGVLRLYNTDNRQSPVLKEWMAHENAVFDVAWVPGEASLVTASGDQMA
KLWDVTSGELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQV
KQISGAHNKMDRNTPSNAKKRRPGTRGMSPSVDSQQSVTVVLFRDAHTLISSGAVDGVIK
TWDLRKNYTAYNHDPIPLQVYPYPGSSTRKLGYSGMVLDSTGSNLFSNCIDDNIYMFNVS
GLKTTPVAVFAGHLNSSFYVKSTVSPDDQFLASGSSDHHTYIWKISDPKQAPMMLQGHNQ
EVTSVAWCPTDFTKIASCSDDNTVRIWRLDRGTDGAKSSVGEANLVGWACPKPATTVSIP
RPLNHVESTTAKSPQAGSLGALSSPQPAACAQGRADVPLPSSTSTLQAQGAKATLLCQKT
SSSIRNWFSRTPMSPWEQVTSPLHTVLSPQSTTGTAPSGRRAKRRLETADCGAAGGCKGA
GECNCVTELYPAAKSSRGLAGMCCPSQEPPQAGTERSEAWGGADLQVEDPSTQADKENHF
PGGADWLSVMSQRLMKGVGNTSSIPRSPSACKRRDGRMPTSPAMRSPRSMQKISSYFQQK
TSE
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgctttttcgctccattgttgacagaggagtccgtaaacggaggcgaaatgacctcagc
ccaaagtacccgttgtcctctctgctggacggctaccagtgtgcacggcatgatgaacac
atctcatacgggaacatgggggtagccgtgccgccttttggatgcgccttctctacagct
cgagggttgcagagtgtatttgctgtggccaacgaggagggtgtcttgaggctctacaac
acagataacagacagagtccagtcctgaaagaatggatggcgcacgagaatgctgtcttt
gacgttgcttgggtgccaggggaggctagcttggtgactgcatcaggtgatcagatggcc
aagctgtgggacgtgacatcgggggaactccttggcagcttcaaggggcaccagtgcagc
ctcaagtcggttgcattcacacagcaggagaaagctgtgttctgtactgggggccgagat
gggaatattatggtctgggacaccaggtgcagcaaaaaagatggattctacaggcaggtg
aagcagatcagcggggctcacaataagatggatagaaacacaccctctaacgcgaagaag
agacgcccaggcacacgcggcatgtccccctctgtggactcccagcagagtgtcaccgtg
gtgctgttccgtgatgcacacaccctcatctcttcaggagctgttgatggggtaatcaag
acgtgggaccttcggaaaaactacactgcctacaaccacgaccccataccactccaggtg
tacccgtacccaggctccagcacacggaaactaggttactcggggatggtgttggactcc
accggctccaacctgttttccaactgcatcgacgacaacatctacatgttcaacgtcagt
ggattgaaaaccactccagtggcagtcttcgctggtcacctcaactcctcgttttacgtc
aagtccactgttagcccagacgaccagttcctggctagtggctcaagtgaccatcataca
tacatctggaagatctctgacccaaagcaggctcctatgatgcttcagggccataaccag
gaagtgacctccgtagcgtggtgcccaacagatttcacaaagattgcttcctgctctgac
gacaacaccgtacggatctggcgtctggaccgggggacggatggagcaaagtcctctgtt
ggagaggccaatctggtgggctgggcatgtcccaaacctgccaccaccgtgtccattcca
aggcctttgaatcacgtggagtccaccacagccaagagtccccaggcagggagtctgggg
gccctgtcctccccccagcctgccgcctgcgcccaaggtagagccgatgtacctctaccc
tccagcacctccactcttcaggcccagggtgctaaggccaccctcctatgccagaaaaca
tcctcctccatcaggaactggttttcccgaacccctatgtctccttgggaacaggtcacc
tctcctctccacacggtgctcagcccccagagcacaaccggtactgctccctcggggagg
agggccaagcgccgactggagacggctgactgtggggcagcagggggctgcaaaggtgca
ggggagtgcaactgcgttacggagctctaccccgcagccaagagcagccggggactggca
ggcatgtgctgccccagccaggagccacctcaggcgggcacagagaggagtgaggcctgg
ggaggagcggacctccaggtggaggacccatccacacaggcagacaaggagaaccacttt
ccaggtggggcagattggttgtcagtgatgagccagaggctgatgaaaggtgtgggaaac
accagcagcattcccagaagccccagtgcctgcaagaggcgagatggcaggatgcccacc
tcaccggcaatgcgctcaccacgatccatgcagaaaatatcctcctacttccagcaaaag
acttcggagtaa

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