Salvelinus namaycush (lake trout): 120019529
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Entry
120019529 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120019529
04082 Neuroactive ligand signaling
120019529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120019529
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120019529
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120019529
NCBI-ProteinID:
XP_038818753
UniProt:
A0A8U0P6B9
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Position
Sna24:complement(7745340..7779380)
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AA seq
471 aa
AA seq
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MPYIKFLFLLFCLILIGECRKHKSRKRRWSGAVESYKHGAPLTGKRMVDNTKSRKLKTDN
LLRVDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS
TTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAA
CNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTS
RLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTLRDGKDR
KLREKAREQSLPCTCGMSHTGTMMVDGTYSESDTNSLAGYTRAPAPEDPPEKQERMVVHI
SLDNESTATKKKTRFRSFSFMQNTHAIDTYSRMIFPGSYIIFNLIYWSVYC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccttatattaagtttttgttcttacttttttgcttgatacttatcggggaatgccga
aagcacaaaagtaggaaaaggcggtggtccggggcggtggaatcttacaagcatggcgct
cccctgactggaaaaaggatggttgacaacaccaaatctcgcaaattgaagacagacaac
ctgctgcgagtggatgaccatgatttcaccatgagaccagcctttgcaggccctgctgtc
cctgtgggggtggatgttcaggtggagagtttggacagtatatcagaggtggacatggac
ttcaccatgaccctgtatctgaggcactactggaaagatgagaggctgtcctttcccagc
acaaccaataagagcatgacgttcgacgggcgcctggtcaagaagatctgggtgcctgat
gtgttcttcgtccactccaagaggtcgttcattcatgacaccaccactgagaacatcatg
ctcagggtgttcccagacggacacgtgctctacagcctcagggtgacggttactgctgcc
tgtaacatggacttcagtcgtttccctctggattcacagacctgcaccttagagctggag
agctatgcttacacggacgaggacctcatgctgtactggaagagtggggatgagtccctg
agcacggatgacaggatctctctgtctcagttcctcatccagaagtttcacactacctcc
agactggctttctacagcagcacaggctggtacaaccgtctgtacatcaacttcaccctg
cgacgccacatcttcttcttcctgcttcagacctacttccctgccactctgatggtcatg
ttgtcctgggtgtccttctggatcgaccgtcgggccgtaccggccagggtctcattaggt
atcaccacggtgctcaccatgtccaccatcatcaccggagtcaacgcctccatgcccagg
gtttcctacatcaaagctgtggacatttacctctgggtcagttttgtgtttgtgttccta
tcggtgctggaatatgctgccgtcaactatctgacaacgttgagggacgggaaagatcgg
aagctcagggaaaaggccagagagcagtcgctcccctgcacatgtggcatgtcccacacc
gggaccatgatggtggacgggacctacagcgagtccgacaccaacagtctagccgggtac
accagggcacccgctcctgaggaccccccggagaagcaggaacgcatggtggtgcacatc
tccttggacaacgagtccacggcaaccaagaagaagacgcgcttccgcagcttcagtttc
atgcagaacacccacgccatagacacctactcccgcatgatctttcctggatcctacatc
attttcaacctcatctactggtctgtgtactgctga
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