Salvelinus namaycush (lake trout): 120019562
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Entry
120019562 CDS
T07522
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120019562
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120019562
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120019562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
KNTC1_N
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
CFAP43_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
120019562
NCBI-ProteinID:
XP_038818794
UniProt:
A0A8U0P7M1
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Position
Sna24:20800488..20996880
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AA seq
1133 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRKLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKTRQPAGGLCDINEGSASEDRCKSPTSVLASN
HQQFYNGGGGRGAKMSRKLSLPTELKPDLDHRDNSFSRSRSSSVTSIDKEAREAITSFHF
CETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIVLPSGTLARLKGSIL
RMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVSPSTSQELQESQYAVVC
SEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCANGHIMTLSLPGLRP
LLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCENLQEMLGELFTPVE
TPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIPGPQGLEGMKGAASGVV
ADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCKDKKWYQF
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcactcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccattccagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagtagtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccatgagtctccggttacctgctgtgag
tactttgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggaagctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatgggctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacaggctcgctctccacgcaagacacgccagcccgccggaggtctctgtgacatc
aacgagggttctgcctcggaggaccgctgcaaatcccccacttcagtgttggcgtcaaac
catcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaattaagc
ttgcctactgagctaaagccagacttggaccaccgggacaactccttcagccggtcacgc
tcctcctccgtcacgtccatagacaaggaggcgcgcgaggccatcacctccttccacttc
tgtgagacattcgcccggaagggggacagcgccatcacaccatgcctgtacgtgggaacc
tccctaggaacagtgctggctgtggccctcaacctgccccctgctggggaacaaaggctg
ctgcagcccgttatcgtcttacctagcggtaccctggcgcgactgaagggcagtatcctg
aggatggccttcctagacaacacaggaaccttcctcccccctgcctttgagacctggtat
gagccaaacgctgcgggcgccgacagtgaggagcgagacaaggcccgtaaacgccgcccg
gtctctgtgtcgccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgc
tctgagaaacaggctaaggtcatagcactgccctcacagaactgcatcttcaaacacagc
atcacagagacatcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgt
gtggcctgcttctgtgctaacggacacatcatgaccctcagtctgccggggctgagaccg
ttgctggatgtaaactacctgccactgacagacatgcggatagcccggaccttctgcttt
accaacctgggccaggccatgtacctcacctcccccactgagatacagaggatcacatac
agccaggagacctgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaa
accccagaggctcccaaccgaggattcttcaagggcctttttgggggaggagcaacttcc
ctggacagagaggaactatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcc
cagcacatcccaggtcctcagggcctggagggcatgaagggggcagcctcgggcgtggtg
gccgacctggcgcgtgcccggatagcactggatgagagagggcagaaactgggcgagctg
gacgagaggacggctgccatgttggccagcgccgactcctttggcaaacacgcccatgac
atgatgctgaagtgcaaagacaagaagtggtaccagttctga
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