Salvelinus namaycush (lake trout): 120019808
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Entry
120019808 CDS
T07522
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecule (CAM) interaction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120019808 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120019808 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120019808 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120019808 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120019808 (cldn1)
04147 Exosome [BR:
snh04147
]
120019808 (cldn1)
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120019808 (cldn1)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120019808 (cldn1)
Exosomal proteins of colorectal cancer cells
120019808 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF7937
TMEM37
DUF6479
OppC_N
Motif
Other DBs
NCBI-GeneID:
120019808
NCBI-ProteinID:
XP_038819147
UniProt:
A0A8U0P6E9
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All DBs
Position
25:33225894..33228347
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLSFFGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEQKRKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACLTIIGGA
FLCCNCSSKGSGKSSRYPPNHSAAPAGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttgtctttttttggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtctacgattctctgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgctggctggcattgccatcctggtggccatggtg
gggatgaagtgtaccacctgtctggctgaggaccaggagcagaagcgcaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaactccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcctgcctcaccatcataggtggagcc
ttcctttgttgcaactgctccagtaaaggctcaggaaagtcctcccgctaccccccgaac
cactccgctgccccggcaggcagagactacgtctag
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